| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,851,914 | Δ1 bp | coding (958/2241 nt) | relA → | ATP:GTP 3'‑pyrophosphotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,851,914 | 0 | G | . | 100.0% | 147.0 / NA | 34 | coding (958/2241 nt) | relA | ATP:GTP 3'‑pyrophosphotransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (15/19); total (15/19) | |||||||||||
GCAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGGC > NC_002947/1851771‑1852055 | gcAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACaa > 2:779548/1‑149 (MQ=255) aaaGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAgg > 1:555382/1‑150 (MQ=255) aaGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGga < 2:631390/150‑1 (MQ=255) aGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGtt < 1:46573/150‑1 (MQ=255) aGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGtt < 1:561541/150‑1 (MQ=255) gATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTg < 2:182145/150‑1 (MQ=255) aTCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGc < 2:528058/150‑1 (MQ=255) cggtgcgCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCCTCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCgg < 2:707701/150‑1 (MQ=255) gcgTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGa < 2:555382/150‑1 (MQ=255) tGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAggg > 2:894639/1‑150 (MQ=255) ggTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGACCGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAg < 2:204175/150‑1 (MQ=255) aTCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACGTCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAgg < 1:69638/150‑1 (MQ=255) cgcgACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGc < 1:536835/150‑1 (MQ=255) gcgACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCa > 2:425430/1‑150 (MQ=255) acCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAgg < 1:742014/135‑1 (MQ=255) acCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAgg > 2:742014/1‑135 (MQ=255) cctcgcTGGGCATCGTGCACACCTTGTGGCGTCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAGCCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCNGTAATCTGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCa < 1:469254/147‑1 (MQ=255) ggCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGc < 1:894639/150‑1 (MQ=255) aTCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAg < 1:15264/113‑1 (MQ=255) aTCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACg > 1:665678/1‑150 (MQ=255) aTCGGGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAg > 2:15264/1‑113 (MQ=255) gCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAagag > 2:598255/1‑150 (MQ=255) acCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCAc < 2:347063/140‑1 (MQ=255) acCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCAc > 1:347063/1‑140 (MQ=255) acCTTGTGGCGGCATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCg > 2:82101/1‑150 (MQ=255) ggcATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTg > 1:600646/1‑146 (MQ=255) ggcATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTg < 2:600646/146‑1 (MQ=255) gcATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAg < 2:975896/87‑1 (MQ=255) gcATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAg > 1:975896/1‑87 (MQ=255) cATATTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTAt > 1:198530/1‑150 (MQ=255) tatTCCCAAGGAGTTCGAC‑ACTACATCGCCAACCCCAAGGAAAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATgc > 2:472060/1‑150 (MQ=255) gAGTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGgc < 1:82101/150‑1 (MQ=255) tgTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTg > 2:665881/2‑49 (MQ=255) tgTTCGAC‑ACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTg < 1:665881/48‑1 (MQ=255) | GCAAGATGCAGCGCAAAGGCCTGGAGTTCAGCCAGATCTACGACGTGCGTGCGGTGCGCGTGCTGGTGCCGGAAATCCGCGACTGCTACACCGCGCTGGGCATCGTGCACACCTTGTGGCGGCATATTCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAGAACGGCTACCGCTCGTTGCACACTGCGGTAATCGGCCCCGAGGGCAAGGTGCTGGAGGTGCAGATCCGTACCCACGGCATGCACGAAGAGGCCGAACTTGGCGTATGCGCCCACTGGC > NC_002947/1851771‑1852055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |