New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6027949 = | 37 (1.200) | 8 (0.310) | 6/228 | 2.5 | 24.5% | intergenic (‑37/+74) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
? | NC_002947 | 6028006 = | 18 (0.690) | intergenic (‑94/+17) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
TGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCC > NC_002947/6027801‑6028091 | tGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGc < 1:628213/150‑1 (MQ=255) ccGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGTCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCgg < 1:345660/150‑1 (MQ=255) ccagtacgatggtggcgacatgaccgcgccgttcggtggcttcaaacagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGc < 2:449745‑M1/6‑1 (MQ=255) agtacgatggtggcgacatgaccgcgccgttcggtggcttcaaacagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCaa > 1:261727‑M1/143‑150 (MQ=255) cccAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAg < 1:246847/148‑1 (MQ=255) cccAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAg > 2:246847/1‑148 (MQ=255) ccAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGccc > 1:687180/1‑150 (MQ=255) ggcacTCCAGGCGGATGAACACCACCTGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCA‑AGATTCGTATGACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGc < 1:235960/146‑1 (MQ=255) ccTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTcc < 2:195668/150‑1 (MQ=255) aGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCaa > 1:103704/1‑150 (MQ=255) gggcgaGGGACACGAGGGGCATGCTGACGCAAAACGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGACCGCTCCTGCAAc < 2:273128/145‑1 (MQ=255) gcAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCACGCACGCCCCTCCAACGGt > 2:357463/1‑150 (MQ=255) gcAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGt > 2:356212/1‑150 (MQ=255) gggACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTcgc > 1:544052/1‑150 (MQ=255) gggACAACAGCGGCATGCTCACGCCAAGCGCAAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAATGCATTACAGCCTCCCTGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTcgc < 2:180028/150‑1 (MQ=255) acacCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGaa < 1:661021/150‑1 (MQ=255) acacCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGaa < 2:424844/150‑1 (MQ=255) gCATGCTCACGCCAAGCGCCAGCCCGACCCTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAg < 2:687180/150‑1 (MQ=255) cACGCCAAGCGCCAGCCCGACCCTGGGCACCGAGCC‑CCATACTGCCAAGTAGGTCCCCCCACGCATTAAAGCCCCACACCCGTTCTTTCAAGGGGCCCATCTGCGGGCAAGCCCGCTCCCGCAACGGTCGCCAAGACCTGCAGGTGCggg < 2:92536/150‑1 (MQ=255) cGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCt > 2:251698/1‑150 (MQ=255) aaacagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGc > 1:449745‑M1/102‑150 (MQ=255) cAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGc > 2:222224/1‑150 (MQ=255) cgcCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCcgc < 2:103704/150‑1 (MQ=255) ccagACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAg < 1:639848/147‑1 (MQ=255) tgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCggg > 2:411464‑M1/82‑129 (MQ=255) tgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCggg < 1:411464‑M1/48‑1 (MQ=255) gctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCggg > 1:724704‑M1/73‑120 (MQ=255) gctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCggg < 2:724704‑M1/48‑1 (MQ=255) cAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTg < 1:356212/150‑1 (MQ=255) gTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCGGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGAt < 2:305047/150‑1 (MQ=255) tggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCg > 1:753146‑M1/62‑107 (MQ=255) tggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCg < 2:753146‑M1/46‑1 (MQ=255) gTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCAGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGcc > 1:152444/1‑150 (MQ=255) ggTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTc > 2:124087/1‑150 (MQ=255) cAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGTCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCgg > 1:548319/1‑150 (MQ=255) gCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTa < 1:222224/150‑1 (MQ=255) cATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCAGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTAc < 2:152444/150‑1 (MQ=255) cacccTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTtctc < 2:392840/147‑1 (MQ=255) aGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCAGCGAAAAGGACCTACCGGGTTACAGCTTGATGCAGGTCGCCTTCAGCTCGGGGTACTTCTcc > 1:366667/1‑150 (MQ=255) gCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCa < 1:124087/150‑1 (MQ=255) ccAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTAc < 2:70664/105‑1 (MQ=255) ccAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTAc > 1:70664/1‑105 (MQ=255) ccAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCATTCAGCTCGGTGTACTTCTCCAGTGCGTGCa > 2:690771/1‑150 (MQ=255) atTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCCCGGTGTACTTCTCCAGTGCGTGCAGCGAc < 2:544052/150‑1 (MQ=255) cAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGAc > 2:366016/1‑145 (MQ=255) cAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGAc < 1:366016/145‑1 (MQ=255) cctttttGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGcc < 1:504637‑M1/143‑1 (MQ=255) | TGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGC‑CAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCC > NC_002947/6027801‑6028091 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |