New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 747113 | 21 (0.750) | 5 (0.190) | 5/230 | NT | 20.1% | intergenic (‑237/‑557) | PP_0638/PP_5448 | transposase/hypothetical protein |
? | NC_002947 | = 747138 | 20 (0.760) | intergenic (‑262/‑532) | PP_0638/PP_5448 | transposase/hypothetical protein |
ACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCTGGTGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/746963‑747113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctggcGTGCCTCACCGTTGGTGACGTCATTGCCAGCACCAGAACG < NC_002947/747138‑747099 ACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCTGGTGCTGG > 1:261713/1‑150 AATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCTGGTGCTGGCGTGCCTCACCGTTGGTGACGTCATTGCCA < 1:653719/150‑1 TGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCTGGTGCTGGCGTGCCTCACCGTTGGTGACGTCATTGCCAGCACCAGAACG < 1:591527/97‑1 TGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCTGGTGCTGGCGTGCCTCACCGTTGGTGACGTCATTGCCAGCACCAGAACG > 2:591527/1‑97 TAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCTGGTGCTGGCGTGCCTCACCGTTGGTGACGTCATTGCCAG < 1:734831/78‑1 TAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCTGGTGCTGGCGTGCCTCACCGTTGGTGACGTCATTGCCAG > 2:734831/1‑78 ACGCTTAGAAAACCCCAGCCACCATAGCTCAATGGCTGCGTTCAGCCTCCAACCCTCAGCGGCAGGGCAGCTCGTGATATCGCTCACGATTGGCTGAGATTCATAGGAAATTTCGGGTAAGAGGGGCGGCACCGACCGTTCTGGTGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/746963‑747113 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgctggcGTGCCTCACCGTTGGTGACGTCATTGCCAGCACCAGAACG < NC_002947/747138‑747099 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |