New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1487042 | 10 (0.360) | 8 (0.380) | 6/186 | NT | 46.3% | intergenic (+51/+79) | yhdZ/degS | amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS |
? | NC_002947 | = 1487072 | 11 (0.520) | intergenic (+81/+49) | yhdZ/degS | amino acid ABC transporter ATP‑binding protein/serine endoprotease DegS |
TCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1486888‑1487042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccttcgcgggcacgcccgctcccacaggAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGCCGGTCGAAGAAGT < NC_002947/1487072‑1486930 TCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCC > 2:508745/1‑150 CATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCGTGCCCGCgaagg < 2:319965/150‑6 TGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACA > 2:718064/1‑150 TCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGG < 1:42113/71‑1 TCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGG > 2:42113/1‑71 CTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCCAAGCCAGCGCTAAACCTGTGG > 1:541986/1‑97 CTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGG < 2:542024/97‑1 CTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGG < 2:541986/97‑1 CTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGG > 1:542024/1‑97 GTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGT < 2:621214/82‑1 GTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGT > 1:621214/1‑82 CTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTTCAAAGCCAGCGCTAAACCTGTGGGAGCGG > 2:127733/1‑83 CTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTTCAAAGCCAGCGCTAAACCTGTGGGAGCGG < 1:127733/83‑1 GCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGC < 1:496336/150‑1 GCGGGCACGCCCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCACGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGC < 1:174987/150‑1 CCGCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGCCGGTCGA > 2:336951/1‑150 GCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAA < 2:284280/119‑1 GCTCCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAA > 1:284280/1‑119 CCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCG > 1:594823/1‑125 CCCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCG < 2:594823/125‑1 CCACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGACGGTCGAAGAAGT > 1:718064/1‑150 ACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGT < 2:178814/119‑1 ACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGT > 1:178814/1‑119 ACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAAC < 2:347028/111‑1 ACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAAC > 1:347028/1‑111 ACAGGAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGG < 1:421892/63‑1 GAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAAT > 2:17023/1‑87 GAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAAT < 1:17023/87‑1 TCATGGACAAGGGCGAGATTGTGGAGCAGGCCGCGCCGGATGACTTCTTCGACCGGCCGCGCAGTGACCGGACCAAGTTGTTCCTCAGCCAGATCCTGCATTGATGCTGTTTGGGCTGCGCGGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1486888‑1487042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccttcgcgggcacgcccgctcccacaggAATTACGCAGGCTCCAAAGCCAGCGCTAAACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCCGCGCAGCCCAAACAGCATCAATGCAGGATCTGGCTGAGGAACAACTTGGTCCGGTCACTGCGCGGCCGGTCGAAGAAGT < NC_002947/1487072‑1486930 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |