New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1768621 | 33 (1.170) | 4 (0.150) | 4/236 | NT | 10.9% | coding (180/480 nt) | PP_1578 | hypothetical protein |
? | NC_002947 | = 1768635 | 34 (1.260) | coding (194/480 nt) | PP_1578 | hypothetical protein |
TCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1768560‑1768621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTCGTCGTTGCG‑CGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGG < NC_002947/1768635‑1768521 TCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGTCGTCGTTGCG‑CGCCGGCAG > 1:371189/1‑82 TCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCGTCGTCGGTGCG‑CGCCGGCAG < 2:371189/82‑1 CATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGG > 1:574029/1‑134 CATGGACTTGGCCCTGCCGGCG‑CGCAACGACGACGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGG < 2:574029/134‑1 TCACACTGGAGACAGGTCAGGTGGTGGTGTGCACGCCATGCGGCATGGACTTGGCCCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1768560‑1768621 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgTCGTCGTTGCG‑CGCCGGCAGGGCCAAGTCCATGCCGCATGGCGTGCACACCACCACCTGACCTGTCTCCAGTGTGATGGTCAGTTCGTCCCAGCCTTTGGTCATCCAGTAGGTGG < NC_002947/1768635‑1768521 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |