New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2074570 = | 38 (1.350) | 4 (0.150) | 4/232 | NT | 10.4% | coding (852/1188 nt) | ygaY | transporter YgaY |
? | NC_002947 | 2074592 = | 33 (1.240) | coding (830/1188 nt) | ygaY | transporter YgaY |
TCTGCTGGCGAATGGCCCCTATCACTATTCGGATGCGGTGATCGGCCTGTTCGGCCTGGCCGGTGCGGCGGGTGCGTTGTCGGCCAACTGGGCCGGACGCCTGGCGGACCGTGGCAAGGGGTCGCTGGGCACCACCGTGGGCC‑TGGTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2074720‑2074570 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggtgCCCAGCGACCCCTTGCCACGGTCCGCCAGGCGTCCGGCCCAGTTGGCCGACAACGCACCCGCCGCACCGGCCAGGCCGAACAGGCCGATCACCGCATCCGAATAGTGATAGGGGCCATTCGCCA > NC_002947/2074592‑2074715 TCTGCTGGCGAATGGCCCCTATCACTATTCGGATGCGGTGATCGGCCTGTTCGGCCTGGCCGGTGCGGCGGGTGCGTTGTCGGCCAACTGGGCCGGACGCCTGGCGGACCGTGGCAAGGGGTCGCTGGGCACCACCGTGGGCC‑TGGTGGT < 1:76110/150‑1 TGGCGAATGGCCCCTATCACTATTCGGATGCGGTGATCGGCCTGTTCGGCCTGGCCGGTGCGGCGGGTGCGTTGTCGGCCAACTGGGCCGGACGCCTGGCGGACCGTGGCAAGGGGTCGCTGGGCACCACCGTGGGCC‑TGG < 1:521436/141‑1 TGGCGAATGGCCCCTATCACTATTCGGATGCGGTGATCGGCCTGTTCGGCCTGGCCGGTGCGGCGGGTGCGTTGTCGGCCAACTGGGCCGGACGCCTGGCGGACCGTGGCAAGGGGTCGCTGGGCACCACCGTGGGCC‑TGG > 2:521436/1‑141 TATCACTATTCGGATGCGGTGATCGGCCTGTTCGGCCTGGCCGGTGCGGCGGGTGCGTTGTCGGCCAACTGGGCCGGACGCCTGGCGGACCGTGGCAAGGGGTCGCTGGGCACCACC‑AGGCCCACGGTGGTGCCCAGCGACCCCTTGCCA < 2:488544/150‑1 TGGGCACCACCGTGGGCC‑TGGTGGTGTCCAGCGACCCCTTGCCACGGTCCGCCAGGCGTCCGGCCCAGTTGGCCGACAACGCACCCGCCGCACCGGCCAGGCCGAACAGGCCGATCACCGCATCCGAATAGTGATAGGGGCCATTCGCCA > 1:670296/1‑150 GGGCACCACCGTGGGCC‑TGGTGGTGCCCAGCGACCCCTTGCCACGGTCCGCCAGGCGTCCGG > 1:302107/1‑62 GGGCACCACCGTGGGCC‑TGGTGGTGCCCAGCGACCCCTTGCCACGGTCCGCCAGGCGTCCGG < 2:302107/62‑1 TCTGCTGGCGAATGGCCCCTATCACTATTCGGATGCGGTGATCGGCCTGTTCGGCCTGGCCGGTGCGGCGGGTGCGTTGTCGGCCAACTGGGCCGGACGCCTGGCGGACCGTGGCAAGGGGTCGCTGGGCACCACCGTGGGCC‑TGGTGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2074720‑2074570 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggtgCCCAGCGACCCCTTGCCACGGTCCGCCAGGCGTCCGGCCCAGTTGGCCGACAACGCACCCGCCGCACCGGCCAGGCCGAACAGGCCGATCACCGCATCCGAATAGTGATAGGGGCCATTCGCCA > NC_002947/2074592‑2074715 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |