New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2723194 | 19 (0.670) | 4 (0.150) | 4/232 | NT | 17.8% | coding (441/846 nt) | PP_2383 | AraC family transcriptional regulator |
? | NC_002947 | = 2723215 | 19 (0.720) | coding (420/846 nt) | PP_2383 | AraC family transcriptional regulator |
GTGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2723125‑2723194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagCGCCTTGCAGCAGCAGACGGCCTGGCGCCA < NC_002947/2723215‑2723186 GTGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAGCGCCTTGCAGCAGCAGACGGCCTGGC > 1:272633/1‑96 GTGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAGCGCCTTGCAGCAGCAGACGGCCTGGC < 2:272633/96‑1 TGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAGCGCCTTGCAGCAGCAGACGGCCTGGCGCCA > 1:708298/1‑99 TGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAGCGCCTTGCAGCAGCAGACGGCCTGGCGCCA < 2:708298/99‑1 GTGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2723125‑2723194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagCGCCTTGCAGCAGCAGACGGCCTGGCGCCA < NC_002947/2723215‑2723186 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |