New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2723194	19 (0.670)	4 (0.150)	4/232	NT	17.8%	coding (441/846 nt)	PP_2383	AraC family transcriptional regulator
	?	NC_002947	= 2723215	19 (0.720)					coding (420/846 nt)	PP_2383	AraC family transcriptional regulator

GTGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2723125‑2723194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagCGCCTTGCAGCAGCAGACGGCCTGGCGCCA  <  NC_002947/2723215‑2723186                                                                                                      GTGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAGCGCCTTGCAGCAGCAGACGGCCTGGC      >  1:272633/1‑96 GTGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAGCGCCTTGCAGCAGCAGACGGCCTGGC      <  2:272633/96‑1  TGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAGCGCCTTGCAGCAGCAGACGGCCTGGCGCCA  >  1:708298/1‑99  TGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAGCGCCTTGCAGCAGCAGACGGCCTGGCGCCA  <  2:708298/99‑1                                                                                                      GTGGCCAGGGGCCGAAGGCTCGGCGCACTGCCCGTGCCGCTGCACCAGGGCCAGCACCGCCTGGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2723125‑2723194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagCGCCTTGCAGCAGCAGACGGCCTGGCGCCA  <  NC_002947/2723215‑2723186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.