New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2732251 | 23 (0.820) | 4 (0.150) | 4/234 | NT | 14.8% | coding (1545/2361 nt) | polB | DNA polymerase II |
? | NC_002947 | = 2732271 | 24 (0.900) | coding (1565/2361 nt) | polB | DNA polymerase II |
ATCATGAATGCCTTTTATGGCGTGCTTGGCTCCAGCGGTTGCCGTTTCTTCGACCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2732192‑2732251 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcATGGTGATCGACGA‑CGCCAGGCGCGGGTCGAAGAAACGGCAACCGCTGGAGCCAAGCACGCCATAAAAGGCATTCATGATGATTTTCAAGGCCTGCGACAGCGGCGCATTGCCCTCGCGCTTG < NC_002947/2732271‑2732149 ATCATGAATGCCTTTTATGGCGTGCTTGGCTCCAGCGGTTGCCGTTTCTTCGACCCGCGCATGGTGATCGACGA‑CGCCAGGCGCGG < 1:518357/86‑1 ATCATGAATGCCTTTTATGGCGTGCTTGGCTCCAGCGGTTGCCGTTTCTTCGACCCGCGCATGGTGATCGACGA‑CGCCAGGCGCGG > 2:518357/1‑86 TTCGACCCGCGCCTGGCG‑TCGTCGATCACCATGCGCGGGTCGAAGAAACGGCAACCGCTGGAGCCAAGCACGCCATAAAAGGCATTCATGATGATTTTCAAGGCCTGCGACAGCGGCGCATTGCCCTCGCGCTTG > 1:399101/1‑135 TTCGACCCGCGCCTGGCG‑TCGTCGATCACCATGCGCGGGTCGAAGAAACGGCAACCGCTGGAGCCAAGCACGCCATAAAAGGCATTCATGATGATTTTCAAGGCCTGCGACAGCGGCGCATTGCCCTCGCGCTTG < 2:399101/135‑1 ATCATGAATGCCTTTTATGGCGTGCTTGGCTCCAGCGGTTGCCGTTTCTTCGACCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2732192‑2732251 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgcATGGTGATCGACGA‑CGCCAGGCGCGGGTCGAAGAAACGGCAACCGCTGGAGCCAAGCACGCCATAAAAGGCATTCATGATGATTTTCAAGGCCTGCGACAGCGGCGCATTGCCCTCGCGCTTG < NC_002947/2732271‑2732149 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |