New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3723220 | 28 (0.990) | 4 (0.150) | 4/240 | NT | 13.0% | coding (434/927 nt) | PP_3288 | universal stress protein family protein |
? | NC_002947 | = 3723267 | 26 (0.950) | coding (481/927 nt) | PP_3288 | universal stress protein family protein |
CTTGAATGAGATCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGATCGAGTTGCTGT > NC_002947/3723074‑3723369 | cTTGAATGAGATCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGACCTGCGCATTCCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTaca < 2:401647/150‑1 (MQ=255) aTCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGgccagc > 1:673188/1‑150 (MQ=255) tGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATg > 2:680762/1‑150 (MQ=255) cacTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACaa < 1:147008/134‑1 (MQ=255) cacTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACaa > 2:147008/1‑134 (MQ=255) acTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGc > 2:620874/1‑150 (MQ=255) tttGCCATGCTGATCAAAGAGCTCGAGCATCAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCCCACAGGGTAATggcg > 2:231114/1‑150 (MQ=255) tGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTgg > 1:590779/1‑150 (MQ=255) gCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGa > 2:590779‑M2/1‑149 (MQ=255) tCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtacc < 2:74323‑M1/147‑51 (MQ=255) tCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtacc > 1:74323‑M1/1‑97 (MQ=255) aaGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCa < 2:673188/150‑1 (MQ=255) cTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCg < 1:231114/150‑1 (MQ=255) tCGAGCATGAGACTTGCTAAATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACTCGAATACCCTTGCACTTGGGACACAAGGCCAGCCATCGGTTGCCACGCAGGGTTCGGGCGGCGGTGGACCTGTCCAGGCCgg > 2:256561/1‑150 (MQ=255) gATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTTCTTCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCCGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCtt < 2:435073/150‑1 (MQ=255) cgcgcAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAAc < 1:680762/150‑1 (MQ=255) cTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGTGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGAtcatca < 1:330698/150‑1 (MQ=255) cTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGAtcatca < 1:620874/150‑1 (MQ=255) cTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCNGGCCGGNGGATCAGTTTGANGGCTTCAACGACCAGATCATCAGCGaa < 1:684386/150‑1 (MQ=255) tGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtaccaggtgcaagggt > 2:425050‑M1/1‑46 (MQ=255) tGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtaccaggtgcaagggt < 1:425050‑M1/108‑63 (MQ=255) ggATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAgc > 2:653849/1‑150 (MQ=255) gATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAgag > 2:684386/1‑148 (MQ=255) gAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAg > 2:281609/1‑150 (MQ=255) gcgAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGatca > 1:676136/1‑116 (MQ=255) gcgAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGatca < 2:676136/116‑1 (MQ=255) aCCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatcca < 1:425050‑M2/108‑47 (MQ=255) aCCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatcca > 2:425050‑M2/1‑62 (MQ=255) ccTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGa > 1:34331/1‑150 (MQ=255) cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGAt > 2:681059/1‑79 (MQ=255) cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGAt < 1:681059/79‑1 (MQ=255) cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGcc < 2:657380/145‑1 (MQ=255) cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGcc > 1:657380/1‑145 (MQ=255) cTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGAAGGGTTCTGGCGGCGGGGGACCTGTCCAGGCGGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGAt > 1:170379/1‑150 (MQ=255) ccTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGATCGAGt > 1:752806/1‑149 (MQ=255) ccTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGATCGAGt < 2:752806/149‑1 (MQ=255) ggTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatccagcgaagtgaacattgcgcgcatccaccaaggctcatgctcgagctctttga > 1:74323‑M2/1‑50 (MQ=255) ggTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatccagcgaagtgaacattgcgcgcatccaccaaggctcatgctcgagctctttga < 2:74323‑M2/147‑98 (MQ=255) tccaccgccgccagaaccctgcgtggcaacgcatggctggccttgtgtaccaggtgcaagggtattcgcgtttcgcgcagcaactggatatccagcgaagtgaacattgcgcgcatccaccaaggctcatgctcgagctctttgatcagc > 2:590779‑M1/1‑1 (MQ=255) | CTTGAATGAGATCCTGATACACTTGCGTGAGCAACCGTTTGCCATGCTGATCAAAGAGCTCGAGCATGAGCCTTGGTGGATGCGCGCAATGTTCACTTCGCTGGATATCCAGTTGCTGCGCGAAACGCGAATACCCTTGCACCTGGTACACAAGGCCAGCCATGCGTTGCCACGCAGGGTTCTGGCGGCGGTGGACCTGTCCAGGCCGGAGGATCAGTTTGAAGGCTTCAACGACCAGATCATCAGCGAAGCGCTGAAGCTGACATTGCAGTGCAATGCCCAGATCGAGTTGCTGT > NC_002947/3723074‑3723369 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |