New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4927328 = | 26 (0.920) | 4 (0.150) | 4/238 | NT | 14.8% | coding (599/1113 nt) | cheBA | chemotaxis response regulator protein‑glutamate methylesterase |
? | NC_002947 | 4927360 = | 21 (0.770) | coding (567/1113 nt) | cheBA | chemotaxis response regulator protein‑glutamate methylesterase |
TTCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGGGCGCGTCTGCGCCTGGCTGGTAAAG > NC_002947/4927189‑4927468 | ttCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGccc > 1:331344/1‑150 (MQ=255) cTTCCTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCg > 2:427321/1‑150 (MQ=255) cTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGa < 2:345804/150‑1 (MQ=255) ttGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAg < 2:245199/150‑1 (MQ=255) gCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTTGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGccac > 2:289402/1‑150 (MQ=255) cAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAg < 2:627551/148‑1 (MQ=255) cAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAg > 1:627551/1‑148 (MQ=255) cAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGCACGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAggg > 2:60573/1‑150 (MQ=255) cAAACGGTTTGGTGAAGGCCGCCGGCATGTGCTGGATCACAACGATCCCCGCCGGGAAATTTGCCGGCAGCCGTTTTGCGTCCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTgg < 1:355750/150‑1 (MQ=255) cAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTgg > 2:202950/1‑150 (MQ=255) cTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTg > 1:600778/1‑104 (MQ=255) cTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTg < 2:600778/104‑1 (MQ=255) ccggcagcgcctgcccgtgcagcggccccgacgccggcggcctcgcagtcgccggcacccaagcgcaaaccctacaaactggtgGCCACCGGCCCCCCCGTGGAGGTACCGATGGccacca < 1:440311‑M1/37‑1 (MQ=255) ccggcagcgcctgcccgtgcagcggccccgacgccggcggcctcgcagtcgccggcacccaagcgcaaaccctacaaactggtgGCCACCGGCCCCCCCGTGGAGGTACCGATGGccacca > 2:440311‑M1/85‑121 (MQ=255) gcctgcccgtgcagcggccccgacgccggcggcctcgcagtcgccggcacccaagcgcaaaccctacaaactggtgGCCACCGGCCCCCCCGTGGAGGTACCGATGGcc > 2:141007‑M1/77‑109 (MQ=255) gcctgcccgtgcagcggccccgacgccggcggcctcgcagtcgccggcacccaagcgcaaaccctacaaactggtgGCCACCGGCCCCCCCGTGGAGGTACCGATGGcc < 1:141007‑M1/33‑1 (MQ=255) tgCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTa < 1:617765/107‑1 (MQ=255) tgCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTa > 2:617765/1‑107 (MQ=255) gATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCg < 1:178331/146‑1 (MQ=255) gATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCg > 2:178331/1‑146 (MQ=255) cAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGc < 1:427321/150‑1 (MQ=255) aaCACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCt > 2:217448/1‑150 (MQ=255) cacGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTAc < 1:382784/77‑1 (MQ=255) cacGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTAc > 2:382784/1‑77 (MQ=255) acGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCa > 2:582634/1‑150 (MQ=255) cGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCAc < 2:331344/150‑1 (MQ=255) gcCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTATCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGgc < 1:202950/150‑1 (MQ=255) aaaTTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGcc > 2:490112/1‑150 (MQ=255) ccGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGGGCGCGTCTGCGCCTGGCTGGTaaa > 1:107110/1‑150 (MQ=255) cGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGGGCGCGTCTGCGCCTGGCTGGTAAAg < 1:289402/150‑1 (MQ=255) | TTCGGCTTCCTTGACGCTGATGCGGCACAGCTTGTCCAGGCGTTCGGCAAACGCTTTGGTGAAGGCCGCCGGCATGTGCTGGATCAACACGATCGGCGCCGGGAAATTGGCCGGCAGCTGCGTCAGTACCCGCTGCAGCGCCACCGGCCCCCCCGTGGAGGTACCGATGGCCACCAGTTTGTAGGGTTTGCGCTTGGGTGCCGGCGACTGCGAGGCCGCCGGCGTCGGGGCCGCTGCACGGGCAGGCGCTGCCGGGCGCGTCTGCGCCTGGCTGGTAAAG > NC_002947/4927189‑4927468 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |