New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5138301 = | 35 (1.240) | 4 (0.150) | 4/236 | NT | 10.7% | coding (440/963 nt) | PP_4523 | agmatinase |
? | NC_002947 | 5138332 = | 33 (1.220) | coding (471/963 nt) | PP_4523 | agmatinase |
CAACACCTTCAACCTGCTGGACGCCGTGCGCATCATCGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCG > NC_002947/5138152‑5138441 | gacggctccagttgaagtcgtcggcggtgtagccctgggcgcgcaggccgatctgcaccacgcggtcgcagtcgagcaggccttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgt < 2:256438‑M1/1‑1 (MQ=255) aaCACCTTCAACCTGCTGGACGCCGTGCGCATCATCGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATc < 2:247289/150‑1 (MQ=255) acacCTTCAACCTGCTGGACGCCGTGCGCATCATCGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCg > 1:93137/1‑150 (MQ=255) cacCTTCAACCTGCTGGACGCCGTGCGCATCATCGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCgg > 1:458453/1‑150 (MQ=255) gctccagttgaagtcgtcggcggtgtagccctgggcgcgcaggccgatctgcaccacgcggtcgcagtcgagcaggccttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgTCGGc < 2:452971‑M1/5‑1 (MQ=255) ttCAACCTGCTGGACGCCGTGCGCATCATCGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAGCACGGCAAGATCGGCCTg > 1:728120/1‑150 (MQ=255) gACGCCGTGCGCATCATCGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGAt < 2:728120/150‑1 (MQ=255) cGCCGTGCGCATCATCGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGc < 2:510832/150‑1 (MQ=255) cGAAGAAGCGTATGACGAGATCGTCAAACACAACGTCATTCCCATGACCCTAGGGGTCGATCACCCCATCACCCTGCCGATACTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTAGTACAAATCGATGCCCACGCCGACGTCaa > 1:82969/1‑150 (MQ=255) agaagCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGa < 2:466915/150‑1 (MQ=255) gaagCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGAc < 2:93137/150‑1 (MQ=255) cGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCgg < 2:608772/150‑1 (MQ=255) gagaTCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGc < 2:139306/150‑1 (MQ=255) tcgAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGagaaga > 1:134119/1‑150 (MQ=255) gcggtcgcagtcgagcaggccttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgTCGGCCTGGTACACATCGATGCCCACGCCGACGTCAAc < 1:388799‑M1/38‑1 (MQ=255) gcggtcgcagtcgagcaggccttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgTCGGCCTGGTACACATCGATGCCCACGCCGACGTCAAc > 2:388799‑M1/89‑126 (MQ=255) cGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACgg > 1:256438/1‑150 (MQ=255) agtcgagcaggccttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgTCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACcac > 1:559169‑M1/81‑124 (MQ=255) agtcgagcaggacttcttccacggcgcggcggaaggtggtgccgtgggcgatcttctcgccgaacatgtggtcgttgacgTCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACcac < 2:559169‑M1/44‑1 (MQ=255) cATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGcac < 2:117508/150‑1 (MQ=255) ccATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCt > 1:547837/1‑150 (MQ=255) ccATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCt > 2:337401/1‑150 (MQ=255) aTGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTc > 1:311873/1‑150 (MQ=255) cccTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTccgcc > 1:365912/1‑150 (MQ=255) aTCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGgaag > 1:499910/1‑150 (MQ=255) aTCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCGGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGgaag > 1:92294/1‑150 (MQ=255) tCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGgaaga > 2:392634/1‑150 (MQ=255) acCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGc < 2:458453/150‑1 (MQ=255) cATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCt > 1:508226/1‑150 (MQ=255) aCCCTGCCGATCCTGCGTGCTCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTc < 2:552768/93‑1 (MQ=255) aCCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCt > 2:393269/1‑50 (MQ=255) aCCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCt < 1:393269/50‑1 (MQ=255) aCCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTc > 1:552768/1‑93 (MQ=255) ccTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGa < 2:40508/150‑1 (MQ=255) ccTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGa < 2:40519/150‑1 (MQ=255) gATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGa > 2:276812/1‑150 (MQ=255) gcgtgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGTGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCgt < 2:118977/150‑1 (MQ=255) gcgtgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCgt < 2:547837/150‑1 (MQ=255) tgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCtt < 1:637513/105‑1 (MQ=255) tgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCtt > 2:637513/1‑105 (MQ=255) tgcgCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGGTGCGCCTTTTAAGAAGGCCTGCTCCACTGCGACCGCgtggt < 1:707575/150‑1 (MQ=255) acGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTgcgcg > 1:634016/1‑150 (MQ=255) ggCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCgtg < 1:76644/129‑1 (MQ=255) ggCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCgtg > 2:76644/1‑129 (MQ=255) | CAACACCTTCAACCTGCTGGACGCCGTGCGCATCATCGAAGAAGCGTATGACGAGATCGTCGAGCACAACGTCATTCCCATGACCCTGGGGGGCGATCACACCATCACCCTGCCGATCCTGCGTGCGCTGCACAAGAAACACGGCAAGATCGGCCTGGTACACATCGATGCCCACGCCGACGTCAACGACCACATGTTCGGCGAGAAGATCGCCCACGGCACCACCTTCCGCCGCGCCGTGGAAGAAGGCCTGCTCGACTGCGACCGCGTGGTGCAGATCGGCCTGCGCG > NC_002947/5138152‑5138441 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |