New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 242078 | 31 (1.100) | 7 (0.260) | 7/234 | NT | 18.5% | intergenic (+10/‑213) | PP_0189/PP_0190 | heme biosynthesis protein/disulfide bond formation protein B |
? | NC_002947 | = 242100 | 32 (1.190) | intergenic (+32/‑191) | PP_0189/PP_0190 | heme biosynthesis protein/disulfide bond formation protein B |
CGCCTGCTCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACAAAGCGT > NC_002947/241952‑242236 | cGCCTGCTCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTt < 1:529049‑M2/150‑2 (MQ=255) cTCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTggggg < 2:529049/150‑1 (MQ=255) tCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttg > 1:189299‑M2/1‑142 (MQ=255) tCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttg < 2:189299‑M2/145‑4 (MQ=255) ggCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTaa < 1:603834/150‑1 (MQ=255) gCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAAt > 2:475165/1‑150 (MQ=255) tGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGACTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttgggg > 1:220643‑M2/1‑133 (MQ=255) tGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGACTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttgggg < 2:220643‑M2/139‑7 (MQ=255) gggCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTa < 2:318456/150‑1 (MQ=255) ggCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTAt < 1:96237/150‑1 (MQ=255) agaCCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCttt < 1:186788/150‑1 (MQ=255) cGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCt > 2:5381/1‑150 (MQ=255) gAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTg > 2:555259/1‑150 (MQ=255) cgcAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCa < 1:5381/150‑1 (MQ=255) agcaACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGtt < 1:2313/150‑1 (MQ=255) ggCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGa > 2:415143/1‑132 (MQ=255) ggCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGa < 1:415143/132‑1 (MQ=255) tgctgGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGcctcc < 1:475165/150‑1 (MQ=255) tgGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCa > 2:133550/1‑115 (MQ=255) tgGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCa < 1:133550/115‑1 (MQ=255) gcTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCCAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCa < 1:574059/72‑1 (MQ=255) gcTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCa > 2:574059/1‑72 (MQ=255) tttGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAg < 1:471896/67‑1 (MQ=255) tttGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAg > 2:471896/1‑67 (MQ=255) cAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCa > 2:153962/1‑150 (MQ=255) aGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAg > 2:455920/1‑150 (MQ=255) aGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGa > 2:250200/1‑150 (MQ=255) cGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACtt < 1:339665/150‑1 (MQ=255) gTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTg < 1:455920/150‑1 (MQ=255) cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttggggtaggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctggaacagc < 1:605762‑M2/117‑87 (MQ=255) cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTttggggtaggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctggaacagc > 2:605762‑M2/1‑31 (MQ=255) cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGaa < 1:678761/74‑1 (MQ=255) cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGaa > 2:678761/1‑74 (MQ=255) cTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATGTAGCTTTCGCGGTCGGTTTGATCGGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTTCTGTCGt > 2:222892/1‑150 (MQ=255) ccccAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGcc > 2:866/1‑150 (MQ=255) ccccAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGcc < 1:555259/150‑1 (MQ=255) cccAAGGCCCGCGCAAAGGTGCGGGCTttggggtgggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctg < 1:591970‑M2/106‑80 (MQ=255) cccAAGGCCCGCGCAAAGGTGCGGGCTttggggtgggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctg > 2:591970‑M2/1‑27 (MQ=255) cccAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCat > 1:630693/1‑100 (MQ=255) cccAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCat < 2:630693/100‑1 (MQ=255) ccAAGGCCCGCGCAAAGGTGCGGGCTttgggggcaggtcaggcgcgcacgccttctggcaaaggcagcgccagcaggcgctcgtccagcaggccaaggccctcctggaacagctggttgctgcgctcggtctcgcccagccccgcgagca < 1:612061‑M2/150‑125 (MQ=255) cAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTg > 1:503800/1‑150 (MQ=255) ggCCCGCGCAAAGGTGCGGGCTttggggtaggtcaggcgcgcacgccttctggcaaaggcagcgc < 1:661728‑M2/65‑44 (MQ=255) ggCCCGCGCAAAGGTGCGGGCTttggggtaggtcaggcgcgcacgccttctggcaaaggcagcgc > 2:661728‑M2/1‑22 (MQ=255) ccGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACaa > 2:691211/1‑150 (MQ=255) gcAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGc < 2:181762/128‑1 (MQ=255) gcAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGc > 1:181762/1‑128 (MQ=255) cAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACAAAGCgt < 2:324874/150‑1 (MQ=255) cAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTCGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACAAAGCgt < 2:503800/150‑1 (MQ=255) | CGCCTGCTCGCGGGGCTGGGCGAGACCGAGCGCAGCAACCAGCTGTTCCAGGAGGGCCTTGGCCTGCTGGACGAGCGCCTGCTGGCGCTGCCTTTGCCAGAAGGCGTGCGCGCCTGACCTACCCCAAGGCCCGCGCAAAGGTGCGGGCTTTGGGGGCAGGTAATTTATCTTTCGCTGTCAGTTTGATCTGAAGTCCATTTCTTCCGTCGCCTCCTACGGCATATCTGGAAATTTCCTACGCGATTCAGTGACTTGTCGTTGCTGTCGTGCCTTGAAACAAAGCGT > NC_002947/241952‑242236 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |