New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2474161 = | 24 (0.850) | 6 (0.260) | 6/200 | NT | 28.2% | intergenic (‑23/+157) | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
? | NC_002947 | 2474229 = | 11 (0.480) | intergenic (‑91/+89) | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
CAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGTGCAAACTGACGGAT > NC_002947/2474082‑2474377 | cAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCga < 1:192469/150‑1 (MQ=255) gaACGAGGGGCAACGGGTTAGGGGAGGTCATGGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTgg > 1:206616/1‑150 (MQ=255) gTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCgg > 2:667339/1‑150 (MQ=255) tCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGaa < 1:551734/150‑1 (MQ=255) tCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGaa < 2:549357/150‑1 (MQ=255) aTCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAaca > 1:747646/1‑150 (MQ=255) gACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCATACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACtt < 2:584676/150‑1 (MQ=255) tGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCa < 1:667339/150‑1 (MQ=255) gcccgctcctacactgatcgatgtaagggcgggcttgcccgcgaacaggccCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt < 1:1694‑M2/53‑1 (MQ=255) gcccgctcctacactgatcgatgtaagggcgggcttgcccgcgaacaggccCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACt > 2:1694‑M2/52‑104 (MQ=255) cccgctcctacactgatcgatgtaagggcgggcttgcccgcgaacaggccCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGc > 1:596778‑M2/51‑125 (MQ=255) cccgctcctacactgatcgatgtaagggcgggcttgcccgcgaacaggccCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGc < 2:596778‑M2/75‑1 (MQ=255) ccgctcctacactgatcgatgtaagggcgggcttgcccgcgaacaggccCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTAAAGACCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc > 2:435448‑M2/50‑150 (MQ=255) gcaattACATCGAGCAGTGGAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAg < 1:720858/146‑1 (MQ=255) ttACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTAt < 1:562909/150‑1 (MQ=255) cactgatcgatgtaagggcgggcttgcccgcgaacaggccCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGAAAACACGAACTGTATCAGGCCTTTTCAGCTATCaa < 1:435448‑M2/110‑1 (MQ=255) gATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTtc > 2:195210/1‑150 (MQ=255) gtgtAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAg > 2:689238/1‑150 (MQ=255) cgggcttgcccgcgaacaggccCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTGCTCAAGCTTTTCCTg < 2:747646‑M2/128‑1 (MQ=255) gcttgcccgcgaacaggccCGAGAATTCAATACACAAGTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTc > 1:607890‑M2/20‑150 (MQ=255) cCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGTGCAAACTGACGGAt > 1:87758‑M2/2‑150 (MQ=255) | CAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCGCGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGAATTCAATACACAACTAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTATCAACTTCTCAAGCTTTTCCTGGTCCCGTGCAAACTGACGGAT > NC_002947/2474082‑2474377 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |