New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5365099 = | 27 (0.960) | 3 (0.110) | 3/230 | NT | 11.1% | coding (1505/1914 nt) | ftsH | integral membrane ATP‑dependent zinc metallopeptidase |
? | NC_002947 | 5365130 = | 23 (0.870) | coding (1474/1914 nt) | ftsH | integral membrane ATP‑dependent zinc metallopeptidase |
GCATGCTGGCTACCGGCACTGCGGCCGAGGAACACCTCGCCCTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGG > NC_002947/5364982‑5365278 | gCATGCTGGCTACCGGCACTGCGGCCGAGGAACACCTCGCCCTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTg < 1:354316/150‑1 (MQ=255) agaagaccgctacagcctctccaagcgtgcgctgatcagccagatctgctcgctgtatggcggccgtatcgccgaggtgatgaccttgggcttcgatggcgtgaccaCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCAt > 1:30652‑M1/108‑150 (MQ=255) gCACTGCGGCCGAGGAACACCTCGCCCTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAg < 2:472270/150‑1 (MQ=255) gCACTGCGGCCGAGGAACACCTCGCCCTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAg < 1:109136/150‑1 (MQ=255) gcctctccaagcgtgcgctgatcagccagatctgctcgctgtatggcggccgtatcgccgaggagatgaccttgggcttcgatggcgtgaccaCTGGCGCGCATGATGTCGTTGGACGCGCCAGTgg < 1:675441‑M1/34‑1 (MQ=255) gcctctccaagcgtgcgctgatcagccagatctgctcgctgtatggcggccgtatcgccgaggagatgaccttgggcttcgatggcgtgaccaCTGGCGCGCATGATGTCGTTGGACGCGCCAGTgg > 2:675441‑M1/94‑127 (MQ=255) acCTCGCCCTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAg > 2:447675/1‑138 (MQ=255) acCTCGCCCTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAg < 1:447675/138‑1 (MQ=255) cTCGCCCTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGc > 1:135918/1‑150 (MQ=255) ctctTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACg > 1:626895/1‑150 (MQ=255) tctTCCTCTGCATACATCAGCGGGCCGAGCTTCTCCGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCCCCTCTGcactccgg > 2:138573/1‑143 (MQ=255) ctctGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGgccgcc > 1:286261/1‑150 (MQ=255) cATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACa > 2:597663/1‑150 (MQ=255) cATACATCAGCGGGCAGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACa < 1:73978/150‑1 (MQ=255) cGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGc < 1:188337/150‑1 (MQ=255) gAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCt > 2:556292/1‑150 (MQ=255) cGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAgcg < 1:426599/150‑1 (MQ=255) ccccATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGc > 1:491772/1‑101 (MQ=255) ccccATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGc < 2:491772/101‑1 (MQ=255) cACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTa < 2:626895/150‑1 (MQ=255) cATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCg < 2:286261/150‑1 (MQ=255) tACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGtctt < 2:135918/150‑1 (MQ=255) atggcgtgaccactggcgcgtccaacgacatcatgcgcgccagTGGTCACGCCATCGAAGCCCAAGGTCATCACCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGtcttct > 1:30652‑M2/44‑150 (MQ=255) gcgagcTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTcc > 1:615531/1‑150 (MQ=255) cgagcTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCg < 2:615531/150‑1 (MQ=255) ccactggcgcgtccaacgacatcatgcgcgccagTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGc > 2:675441‑M2/35‑127 (MQ=255) ccactggcgcgtccaacgacatcatgcgcgccagTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGc < 1:675441‑M2/93‑1 (MQ=255) cATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTTGCTGATCAGCGCACGCTTGGAGATGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTcac > 2:140778/1‑150 (MQ=255) atgatgTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAg > 2:209960/1‑84 (MQ=255) atgatgTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAg < 1:209960/84‑1 (MQ=255) aCGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGgccgc > 2:596854/1‑57 (MQ=255) aCGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGgccgc < 1:596854/57‑1 (MQ=255) ccagTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCAcgc < 1:556292‑M2/146‑1 (MQ=255) agTGGTCACGCCATCGAAGCCCAAGGTCATCACCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCgg < 2:30652‑M2/148‑1 (MQ=255) gTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCggg > 1:388229‑M2/2‑150 (MQ=255) | GCATGCTGGCTACCGGCACTGCGGCCGAGGAACACCTCGCCCTCTTCCTCTGCATACATCAGCGGGCCGAGCTTCTCGGACAGGCCCCATTTGGTCACCATGTTACGAGCGAGCTGGCTGGCGCGCATGATGTCGTTGGACGCGCCAGTGGTCACGCCATCGAAGCCCAAGGTCATCTCCTCGGCGATACGGCCGCCATACAGCGAGCAGATCTGGCTGATCAGCGCACGCTTGGAGAGGCTGTAGCGGTCTTCTTCCGGCAGGAACATGGTCACACCCAAGGCACGACCACGCGGG > NC_002947/5364982‑5365278 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |