New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2264038 = | 21 (0.730) | 6 (0.220) | 6/252 | 2.7 | 24.0% | intergenic (+167/‑56) | trpF/accD | N‑(5'‑phosphoribosyl)anthranilate isomerase/acetyl‑CoA carboxylase carboxyltransferase subunit beta |
? | NC_002947 | 2264075 = | 18 (0.650) | intergenic (+204/‑19) | trpF/accD | N‑(5'‑phosphoribosyl)anthranilate isomerase/acetyl‑CoA carboxylase carboxyltransferase subunit beta |
GCTGCGCGCCATCGTCCATAGCTTTCGCAGCCCTGCGGGCCGCATGCCAGCACCTGTGGCGGCAAAAAAACACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAGGGCCTGTGGCACAAGTGCC > NC_002947/2263890‑2264187 | cagctccggacgatacagcacggcctcgcaggacgggcacttgtgccacaggccctcaggcaccgagctctttttcacctcggaacgcatgatcgaagggatcagtttgtcgactaaccagttgctcatgctttctttctccagtattgg > 1:330840‑M1/149‑150 (MQ=255) agctccggacgatacagcacggcctcgcaggacgggcacttgtgccacaggccctcaggcaccgagctctttttcacctcggaacgcatgatcgaagggatcagtttgtcgactaaccagttgctcatgctttctttctccagtaatggc > 2:573344‑M1/148‑150 (MQ=255) gTCCATAGCTTTCGCAGCCCTGCGGGCCGCATGCCAGCACCTGTGGCGGCAAAAAAACACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCg > 1:468743/1‑150 (MQ=255) cacggcctcgcaggacgggcacttgtgccacaggccctcaggcaccgagctctttttcacctcggaacgcatgatcgaagggatcagtttgtcgactaaccagttgctcatgctttctttctccagtattGGCAGGGCAGGGCCGGTGAc < 2:170355‑M1/20‑1 (MQ=255) tttCGCAGCCCTGCGGGCCGCATGCCAGCACCTGTGGCGGCAAAAAAACACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCg > 1:235726/1‑150 (MQ=255) cTGCGGGCCGCATGCCAGCACCTGTGGCGGCAAAAAAACACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCt < 2:488188/150‑1 (MQ=255) cTGCGGGCCGAAAGACAGCACCTGTGGCAGCAAAAAAACACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCt < 2:371131/150‑1 (MQ=255) gggcacttgtgccacaggccctcaggcaccgagctctttttcacctcggaacgcatgatcgaagggatcagtttgtcgactaaccagttgctcatgctttctttctccagtattGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGc > 1:170355‑M1/115‑150 (MQ=255) cGGGCCGCATGCCAGCACCTGTGGCGGCAAAAAAACACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGcc < 1:520825/150‑1 (MQ=255) gCCGCATGCCAGCACCTGTGGCGGCAAAAAAACACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAAt > 2:384544/1‑150 (MQ=255) cacaggccctcaggcaccgagctctttttcacctcggaacgcatgatcgaagggatcagtttgtcgactaaccagttgctcatgctttctttctccagtattGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTg > 2:691987‑M1/103‑146 (MQ=255) cacaggccctcaggcaccgagctctttttcacctcggaacgcatgatcgaagggatcagtttgtcgactaaccagttgctcatgctttctttctccagtattGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTg < 1:691987‑M1/44‑1 (MQ=255) cTGTGGCGGCAAAAAAACACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGaaagaaag > 2:460083/1‑150 (MQ=255) aaaaaaaCACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAAc > 1:684991/1‑150 (MQ=255) aaaaaaCACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACt < 1:460083/150‑1 (MQ=255) aaaaaCACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTg > 2:306317/1‑150 (MQ=255) aaaaCACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTgg < 1:384544/150‑1 (MQ=255) tAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGaa < 2:468743/150‑2 (MQ=255) cctcggaacgcatgatcgaagggatcagtttgtcgactaaccagttgctcatgctttctttctccagtattGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATAc < 1:554279‑M1/42‑1 (MQ=255) cctcggaacgcatgatcgaagggatcagtttgtcgactaaccagttgctcatgctttctttctccagtattGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATAc > 2:554279‑M1/72‑113 (MQ=255) gTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGt < 1:99104/136‑1 (MQ=255) gTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGt > 2:99104/1‑136 (MQ=255) aaaGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAgg < 1:306317/150‑1 (MQ=255) aaaGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAgg > 1:663458/1‑150 (MQ=255) ttttGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCACCGCCTCGCAATACCGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAGGGCCtg < 2:663458/150‑1 (MQ=255) gCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGGGAAAGAAAGCATGAGCAACTGGTTa > 2:39525/1‑78 (MQ=255) gCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGGGAAAGAAAGCATGAGCAACTGGTTa < 1:39525/78‑1 (MQ=255) tCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAAc > 1:537077/1‑86 (MQ=255) tCAAGGGCAGGGCAGGGCCGGCGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAAc < 2:537077/86‑1 (MQ=255) GGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAGGGCCTGTGGCACAAGTGcc < 2:495097‑M1/150‑1 (MQ=255) | GCTGCGCGCCATCGTCCATAGCTTTCGCAGCCCTGCGGGCCGCATGCCAGCACCTGTGGCGGCAAAAAAACACATTAGCGGTGGAGTGGCGCGCTGGAAGCCCCGGCGGCCGGTCCACCATCGTTTCATAAAAGATTTTGAGCTCAAGGGCAGGGCAGGGCCGGTGACGCCGTCCCCCGCCTGCCAATACTGGAGAAAGAAAGCATGAGCAACTGGTTAGTCGACAAACTGATCCCTTCGATCATGCGTTCCGAGGTGAAAAAGAGCTCGGTGCCTGAGGGCCTGTGGCACAAGTGCC > NC_002947/2263890‑2264187 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |