New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2950146 = | 29 (1.250) | 4 (0.180) | 3/236 | NT | 14.7% | coding (1119/1374 nt) | oguA | 8‑oxoguanine deaminase |
? | NC_002947 | 2950187 = | 19 (0.870) | coding (1078/1374 nt) | oguA | 8‑oxoguanine deaminase |
CGCACGCGAAGCACTGGAGATTGCCACCCTGGGTGGC‑‑GCGAAAGTGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2950194‑2950146 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtgcttCGCGTGCGGTCATCGCGTCAGGGCCAAAGCCCACCCGTTGCAGCAGCAGGGCCTGACGCACTTCACCGATCATGCTGGCGCCGTCGTTGGAGGCAGAGCCATCGACCCC > NC_002947/2950187‑2950295 CGCACGCGAAGCACTGGAGATTGCCACCCTGGGTGGCAATCTCCAGTGCTTCGCGTGCGGTCATCGCGTCAGGGCCAAAGCCCACCCGTTGCAGCAGCAGGGCCTGACGCACTTCACCGATCATGCTGGCGCCGTCGTTGGAGGCAGAGC > 2:534723/1‑150 CGCACGCGAAGCACTGGAGATTGCCACCCTGGGTGGC‑‑GCGAAAGTGCTTCGCGTGCGGTCATCGCGTCAGGGCCAAAGCCCACCCGTTGCAGCAGCAGGGCCTGACGCACTTCACC > 1:24745/1‑116 CGCACGCGAAGCACTGGAGATTGCCACCCTGGGTGGC‑‑GCGAAAGTGCTTCGCGTGCGGTCATCGCGTCAGGGCCAAAGCCCACCCGTTGCAGCAGCAGGGCCTGACGCACTTCACC < 2:24745/116‑1 AAGCACTGGAGATTGCCACCCTGGGTGGC‑‑GCGAAAGTGCTTCGCGTGCGGTCATCGCGTCAGGGCCAAAGCCCCCCCGTTGCAGCAGCAGGGCCTTAAGCACTTCACCGATAATGCTGGCGCCGTCGTTGGAGGCAGAGCCATCGACCac > 1:274887/1‑148 CGCACGCGAAGCACTGGAGATTGCCACCCTGGGTGGC‑‑GCGAAAGTGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2950194‑2950146 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtgcttCGCGTGCGGTCATCGCGTCAGGGCCAAAGCCCACCCGTTGCAGCAGCAGGGCCTGACGCACTTCACCGATCATGCTGGCGCCGTCGTTGGAGGCAGAGCCATCGACCCC > NC_002947/2950187‑2950295 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |