New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3584572 = | 21 (0.910) | 3 (0.140) | 3/240 | NT | 14.6% | coding (687/1011 nt) | benC | benzoate 1,2‑dioxygenase electron transfer component |
? | NC_002947 | 3584616 = | 15 (0.680) | coding (731/1011 nt) | benC | benzoate 1,2‑dioxygenase electron transfer component |
ACGCCGTAGATCAGGTGCAGCGGGTGCTCGCTGCCCTGCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3584616‑3584572 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCAGT > NC_002947/3584616‑3584720 ACGCCGTAGATCAGGTGCAGCGGGTGCTCGCTGCCCTGCTCGGCGTGACCACCGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCAGT > 1:385508/1‑150 GTAGATCAGGTGCAGCGGGTGCTCGCTGCCCTGCTCGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAA < 1:540939/104‑1 GTAGATCAGGTGCAGCGGGTGCTCGCTGCCCTGCTCGGCGTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAA > 2:540939/1‑104 ACGCCGTAGATCAGGTGCAGCGGGTGCTCGCTGCCCTGCTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3584616‑3584572 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTGACCAACGACTTTGATCTGGTCGAACTCGACCGCCTGCAAGCGCTGGCGGCACGTATCCCCAACTTCACCTACAGCGCCTGCGTCGCCAACCCGGACAGCCAGT > NC_002947/3584616‑3584720 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |