New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4422784 | 26 (1.120) | 4 (0.180) | 4/240 | NT | 14.0% | coding (208/300 nt) | PP_5645 | hypothetical protein |
? | NC_002947 | = 4422807 | 24 (1.080) | coding (185/300 nt) | PP_5645 | hypothetical protein |
AATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4422740‑4422784 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcatTCGATTCCCGCCATAGTGAATCGATGACCAAGGCCTTGGCATGG < NC_002947/4422807‑4422764 AATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATTCGATTCCCGCCATAGTGAATCGATGACCAAGGCCTTGG < 1:589071/84‑1 AATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATTCGATTCCCGCCATAGTGAATCGATGACCAAGGCCTTGG > 2:589071/1‑84 ATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATTCGATTCCCGCCATAGTGAATCGATGACCAAGGCCTTGGCATGG > 1:567187/1‑88 ATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCATTCGATTCCCGCCATAGTGAATCGATGACCAAGGCCTTGGCATGG < 2:567187/88‑1 AATTCGGCGAGCACGGCCTATGCCCCATGCCAAGGCCTTGGTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4422740‑4422784 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcatTCGATTCCCGCCATAGTGAATCGATGACCAAGGCCTTGGCATGG < NC_002947/4422807‑4422764 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |