New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4450402 =	23 (1.000)	3 (0.140)	5/240	NT	11.1%	coding (432/474 nt)	nicA	nicotinate dehydrogenase subunit A
	?	NC_002947	4450420 =	26 (1.170)					coding (450/474 nt)	nicA	nicotinate dehydrogenase subunit A

GCCCTTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4450548‑4450402 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAA  >  NC_002947/4450420‑4450565                                                                                                                                                                                                                                                                                                       GCCCTTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGCCGTGCGCCGCGCTGC                                                                                                                                                 <  1:345290/150‑1                 CCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGCCGTGCGCCGCGCTGCCGAGACCCGGAGAAAG                                                                                                                                 <  2:470916/150‑1                                                                            GTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGCCGTGCGCCGCGCTGC                                                                                                                                                 >  1:482647/1‑75                                                                            GTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGCCGTGCGCCGCGCTGC                                                                                                                                                 <  2:482647/75‑1                                                                                                                                 AGCGCGGCGCACGGCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGT                 >  2:33358/1‑150                                                                                                                                   CGCGGCGCACGGCGCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGA               <  1:33358/150‑1                                                                                                                                                GCGCTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAA  <  1:528098/150‑1                                                                                                                                                                                                                                                                                                       GCCCTTGGCCACAGGGCCTGAGGGCGGGGTGATCTGGTCGACGATCAGCAACACGCCGGTCTTGGCCAGCAGTTGGTCGCGGCTGGGCACCTGTTGTGAGTGGTTCATGGCTTTCTCCGGGTCTCGGCAGCGCGGCGCACGGCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4450548‑4450402 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcTGCCGAGACCCGGAGAAAGCCATGAACCACTCACAACAGGTGCCCAGCCGCGACCAACTGCTGGCCAAGACCGGCGTGTTGCTGATCGTCGACCAGATCACCCCGCCCTCAGGCCCTGTGGCCAAGGGCGTGACACCTACAGTCAA  >  NC_002947/4450420‑4450565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.