| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4773132 | 32 (1.380) | 4 (0.190) | 4/232 | NT | 13.2% | coding (6180/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4773195 | 23 (1.070) | coding (6117/10413 nt) | pvdD | non‑ribosomal peptide synthetase | |||||
TTGTCCTGCATACCGACTTGGGGCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4773010‑4773132‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccggcGCACCTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAACCTCTTGCCGGCACCGGATTTCAACGCCGCCAGGCAGGTGTATGTCGCTCCGCGCACGGCGCTGGAGCAGCAACTGGCGTCGATCTGGGAGA < NC_002947/4773195‑4773047 TTGTCCTGCATACCGACTTGGGGCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCGCACCTGATGCTGCTCGCCAACTTGCC > 2:92262/1‑150 TTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCGCACCTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCG > 1:591341/1‑150 CCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCGCACCTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAACCTCTTGCCGG < 2:591341/150‑1 GATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGCGCACCTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAACCTCTTGCCGGCAC < 1:92262/150‑1 CGCACCTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAACCTCTTGCCGGCACCGGATTTCAACGCCGCCAGGCAGGTGTATGTCGCTCCGCGCACGGCGCTGGAGCAGCAACTGGCGTCGATCTGGGAGA < 1:597816/150‑1 TTGTCCTGCATACCGACTTGGGGCAGGTTCAGCACCGTCTCCCAGATCGACGCCAGTTGCTGCTCCAGCGCCGTGCGCGGAGCGACATACACCTGCCTGGCGGCGTTGAAATCCGGTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4773010‑4773132‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccggcGCACCTGATGCTGCTCGCCAACTTGCCGGTCACCGCCAACGGCAAGTTGGCGCGCAACCTCTTGCCGGCACCGGATTTCAACGCCGCCAGGCAGGTGTATGTCGCTCCGCGCACGGCGCTGGAGCAGCAACTGGCGTCGATCTGGGAGA < NC_002947/4773195‑4773047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |