| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5076538 = | 16 (0.690) | 3 (0.130) | 3/244 | NT | 16.4% | coding (51/600 nt) | phnN | ribose 1,5‑bisphosphate phosphokinase |
| ? | NC_002947 | 5076570 = | 15 (0.660) | coding (19/600 nt) | phnN | ribose 1,5‑bisphosphate phosphokinase | |||||
TGACGCAAGCGACCGCCGATCAGGGACGGGCCGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5076574‑5076538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgCGTCATGTTGCATAGCCACTATGCTCTATAGAGGGAACCGGCGCATTCTAGGGCTTTTCTGGGCATTTTTCTGCGTTTTACCGATTGTTGACGGCAAAAGACTGACGGCCAGG > NC_002947/5076570‑5076682 TGACGCAAGCGACCGCCGATCAGGGACGGGCCGGTTGCGTCATGTTGCATAGCCACTATGCTCTATAGAGGGAACCGGCGCATTCTAGGGCTTTTCTGGGCATTTTTCTGCGTTTTACCGATTGTTGACGGCAAAAGACTGACGGCCAGG > 1:63571/1‑150 AAGCGACCGCCGATCAGGGACGGGCCGGTTGCGTCATGTTGCATAGCCACTATGCTCTATAGAGGGAACCGGCGCATTCTAGGG < 1:321211/84‑1 AAGCGACCGCCGATCAGGGACGGGCCGGTTGCGTCATGTTGCATAGCCACTATGCTCTATAGAGGGAACCGGCGCATTCTAGGG > 2:321211/1‑84 TGACGCAAGCGACCGCCGATCAGGGACGGGCCGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5076574‑5076538‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgCGTCATGTTGCATAGCCACTATGCTCTATAGAGGGAACCGGCGCATTCTAGGGCTTTTCTGGGCATTTTTCTGCGTTTTACCGATTGTTGACGGCAAAAGACTGACGGCCAGG > NC_002947/5076570‑5076682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |