New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5386494 =	24 (1.040)	4 (0.180)	4/238	NT	15.7%	intergenic (+31/‑45)	lldD/dld2	L‑lactate dehydrogenase/D‑lactate dehydrogenase
	?	NC_002947	5386527 =	20 (0.910)					intergenic (+64/‑12)	lldD/dld2	L‑lactate dehydrogenase/D‑lactate dehydrogenase

TAGAAGCTGGCGTCGGTGCCGAAGGCCAGGGTGGAGGTGGGGTCGTCGAAGCGGCGTTCGGCGGGGATCAGGCGCTCGGCATCACGCAGGAACGCGGCGGGCAGGCTCATGCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5386648‑5386494 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccgCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTG  >  NC_002947/5386527‑5386673                                                                                                                                                                                                                                                                                                                TAGAAGCTGGCGTCGGTGCCGAAGGCCAGGGTGGAGGTGGGGTCGTCGAAGCGGCGTTCGGCGGGGATCAGGCGCTCGGCATCACGCAGGAACGCGGCGGGCAGGCTCATGCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATG                                                                                                                                                          <  1:382766/150‑1  AGAAGCTGGCGTCGGTGCCGAAGGCCAGGGTGGAGGTGGGGTCGTCGAAGCGGCGTTCGGCGGGGATCAGGCGCTCGGCATCACGCAGGAACGCGGCGGGCAGGCTCATGCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATGC                                                                                                                                                         <  2:28868/150‑1                                                                                                               GCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGC                                            >  1:516281/1‑150                                                                                                                               GCTGTGGCGTCTGTGCGCTACATGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCC                                                                                                                   >  1:361314/1‑63                                                                                                                               GCTGTGGCGTCTGTGCGCTACATGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCC                                                                                                                   <  2:361314/63‑1                                                                                                                                         CTGTGCGCTACATGCCCCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGAT                  <  2:516281/150‑1                                                                                                                                                      GCCCCGCGAGGGGACTGCATGAGCCTGCACGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCCCCGACGCCCGCTTCTACCGCTTGATCCGCAAGCTGGTG     >  2:29625/1‑150                                                                                                                                                         CCGCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTG  >  2:597211/1‑150                                                                                                                                                                                                                                                                                                                TAGAAGCTGGCGTCGGTGCCGAAGGCCAGGGTGGAGGTGGGGTCGTCGAAGCGGCGTTCGGCGGGGATCAGGCGCTCGGCATCACGCAGGAACGCGGCGGGCAGGCTCATGCAGTCTCCTCGCGGGGCTGTGGCGTCTGTGCGCTACATGCCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5386648‑5386494 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccgCGAGGAGACTGCATGAGCCTGCCCGCCGCGTTCCTGCGTGATGCCGAGCGCCTGATCCCCGCCGAACGCCGCTTCGACGACCCCACCTCCACCCTGGCCTTCGGCACCGACGCCAGCTTCTACCGCTTGATCCCCAAGCTGGTGGTG  >  NC_002947/5386527‑5386673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.