New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5480444 | 26 (1.120) | 3 (0.140) | 3/236 | NT | 10.1% | coding (920/993 nt) | prmA | ribosomal protein L11 methyltransferase |
? | NC_002947 | = 5480514 | 29 (1.330) | coding (990/993 nt) | prmA | ribosomal protein L11 methyltransferase |
CATGCCGGCGATGCAGGCCGACGTGCTGGTTGCCAACATCCTCGCCGGCCCGCTGGTGTCGCTGGCGCCACAGTTGTCCGGCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5480289‑5480444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcttaGCGACGCCGACCACTGATGCGCACCCAGCCGTCGCGCACGACGATCGGGTCCAGTTCAAAGTCGGCGGCATAAGCGGCGGCCACGTCTTCACCTTGCTCGGCGAGGATGCCCGAAAGCGCCAGCAGGCCACCTGGGCGAACCAGGCC < NC_002947/5480514‑5480368 CATGCCGGCGATGCAGGCCGACGTGCTGGTTGCCAACATCCTCGCCGGCCCGCTGGTGTCGCTGGCGCCACAGTTGTCCGGCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGC < 1:62932/150‑1 ATGCCGGCGATGCAGGCCGACGTGCTGGTTGCCAACATCCTCGCCGGCCCGCTGGTGTCGCTGGCGCCACAGTTGTCCGGCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCC > 2:142631/1‑150 GCCCGCTGGTGTCGCTGGCGCCACAGTTGTCCGGCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTAGCGACGCCGACCACTGATGCGCACCCAGCCGTCGCGCACGA > 2:13845/1‑150 GGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTAGCGACGCCGACCACTGATGCGCACCCAGCCGTCGCGCACGACGATCGGGTCCAGTTCAAAGTCGGCGGCATAAGCGGC < 1:13845/150‑1 GGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTAGCGACGCCGACCACTGATGCGCACCCAGCCGTCGCGCACGACGATCGGGTCCAGTTCAAAGTCGGCGGCATAAGCGGCGGCCACGTCTTCA < 1:142631/150‑1 TTAGCGACGCCGACCACTGATGCGCACCCAGCCGTCGCGCACGACGATCGGGTCCAGTTCAAAGTCGGCGGCATAAGCGGCGGCCACGTCTTCACCTTGCTCGGCGAGGATGCCCGAAAGCGCCAGCAGGCCACCTGGGCGAACCAGGCC < 1:545985/150‑1 CATGCCGGCGATGCAGGCCGACGTGCTGGTTGCCAACATCCTCGCCGGCCCGCTGGTGTCGCTGGCGCCACAGTTGTCCGGCCTGGTTCGCCCAGGTGGCCTGCTGGCGCTTTCGGGCATCCTCGCCGAGCAAGGTGAAGACGTGGCCGCCGCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5480289‑5480444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcttaGCGACGCCGACCACTGATGCGCACCCAGCCGTCGCGCACGACGATCGGGTCCAGTTCAAAGTCGGCGGCATAAGCGGCGGCCACGTCTTCACCTTGCTCGGCGAGGATGCCCGAAAGCGCCAGCAGGCCACCTGGGCGAACCAGGCC < NC_002947/5480514‑5480368 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |