| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5735740 = | 28 (1.210) | 6 (0.270) | 6/240 | NT | 20.0% | intergenic (‑21/+88) | hutH/hutU | histidine ammonia‑lyase/urocanate hydratase |
| ? | NC_002947 | 5735777 = | 21 (0.950) | intergenic (‑58/+51) | hutH/hutU | histidine ammonia‑lyase/urocanate hydratase | |||||
AAGAAGGAGCGCGCAGGTACCCACAAGCGGGCCTGCGGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5735781‑5735740‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctccTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGTGACGCATGACGCCAGTCCCTG > NC_002947/5735777‑5735925 AAGAAGGAGCGCGCAGGTACCCACAAGCGGGCCTGCGGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTC < 1:322528/129‑1AAGAAGGAGCGCGCAGGTACCCACAAGCGGGCCTGCGGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTC > 2:322528/1‑129 GAGCGCGCAGGTACCCACAAGCGGGCCTGCGGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATC < 1:463997/89‑1 GAGCGCGCAGGTACCCACAAGCGGGCCTGCGGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATC > 2:463997/1‑89 CGCGCAGGTACCCACAAGCGGGCCTGCGGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTG < 1:491692/124‑1 CGCGCAGGTACCCACAAGCGGGCCTGCGGCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTG > 2:491692/1‑124 GCTCCTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGTGACGCATGACGCCAGTC > 1:393803/1‑150 CTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGTGACGCATGACGCCAGTCCCTG > 1:17646/1‑150 AAGAAGGAGCGCGCAGGTACCCACAAGCGGGCCTGCGGCTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5735781‑5735740‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctccTTCTTGTTGTTCAGTATCACCCCTTGCAGGGTGCGATCCAAAGCGTGGTGATCAGCCGGTGATCATCGGCAGGTCCAGGCCCTGCTCCTTGGCGCAGTCGATGGCGATGTCATAACCGGCATCGGCGTGACGCATGACGCCAGTCCCTG > NC_002947/5735777‑5735925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |