New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 529914 = | 27 (1.170) | 6 (0.280) | 6/228 | NT | 18.3% | intergenic (+8/‑176) | PP_5SC/birA | 5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
? | NC_002947 | 529950 = | 29 (1.380) | intergenic (+44/‑140) | PP_5SC/birA | 5S ribosomal RNA/bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
GAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530031‑529914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggggttttgTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCTTA > NC_002947/529950‑530071 GAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTGGGCTTAAAAATCCT > 1:512191/1‑140 GAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTGGGCTTAAAAATCCT < 2:512191/140‑1 AGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTGG < 1:162320/114‑1 AGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTATCTGCGCATGCAGGTAGGGGTTTTGTCTTTGTGG > 2:162320/1‑114 CCCTACCTGCATGCGCAGATAGGGGTTTTGTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCT > 1:159458/1‑150 CTACCTGCATGCGCAGATAGGGGTTTTGCCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCTTA > 1:332409/1‑150 GAAAAGGGCCTGCAGGAGAGGCCGCGTATCGCAATCACAGGGAGGAGCATTGGCAAGGCCAGGATTTTTAAGCCCACAAAGACAAAACCCCTACCTGCATGCGCAGATAGGGGTTTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530031‑529914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggggttttgTCTTTGTGGGCTTAAAAATCCTGGCCTTGCCAATGCTCCTCCCTGTGATTGCGATACGCGGCCTCTCCTGCAGGCCCTTTTCCTATGCAAGCCAACAGCCCATGGCTATCATGCCTGCCTTA > NC_002947/529950‑530071 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |