New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2087064 | NA (NA) | 8 (0.360) | 7/240 | NT | NA | coding (1136/1302 nt) | PP_1865 | transposase |
? | NC_002947 | = 2087083 | NA (NA) | coding (1155/1302 nt) | PP_1865 | transposase |
AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086911‑2087064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggc‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC < NC_002947/2087083‑2086935 AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACC > 1:605980/1‑150 CGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTG < 2:351211/150‑1 GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG < 1:134190/150‑1 GAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG < 1:494652/150‑1 CCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTG > 2:412092/1‑150 ATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCTCCAGCAGGCGCTGAGCC < 1:89285/150‑1 ATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCA < 1:562669/150‑1 CTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAG < 1:172933/147‑1 CTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCAG > 2:172933/1‑147 AGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCA < 1:558767/95‑1 AGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑CAGCTCCAGCAGGCGCTGAGCCA > 2:558767/1‑95 GAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG > 1:585702/1‑61 GAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGG < 2:585702/61‑1 ATGCCCGTTGTTCCGATGGAAAACCTGGCTCAGCGCCTGCTGGAGCTG‑GCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAG > 1:412092/1‑150 CTGGC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCA > 1:283071/1‑150 GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCACCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTC < 1:590098/83‑1 GC‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCACCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTC > 2:590098/1‑83 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC > 2:274035/1‑150 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGA > 1:404715/1‑96 C‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGA < 2:404715/96‑1 AGCGAAGTGTTGAACAGGCTCACCGCGATGCCTTGCCCGAGAATTGGGAAGCCTCGATCTATCACTTGGCGGTGCAGATCAGAGGGGGTTACGAAGGCATGCAGATTGCCCTGCCATCCGAGTACATGCCCGTTGTTCCGATGGAAAACCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2086911‑2087064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggc‑CAGCTCCAGCAGGCGCTGAGCCAGGTTTTCCATCGGAACAACGGGCATGTACTCGGATGGCAGGGCAATCTGCATGCCTTCGTAACCCCCTCTGATCTGCACCGCCAAGTGATAGATCGAGGCTTCCCAATTCTCGGGCAAGGCATCGC < NC_002947/2087083‑2086935 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |