New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2302573 =	31 (1.340)	3 (0.140)	3/234	NT	12.2%	coding (242/267 nt)	PP_2026	hypothetical protein
	?	NC_002947	2302663 =	14 (0.650)					coding (152/267 nt)	PP_2026	hypothetical protein

CCTTGCCGGACCGGTCGCAGAGGGCCGCAACATGGCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCATTGGCGCAGATGTATTCGTCCAGCGAGTCTTCGATGCCGGCCATCAACT  >  NC_002947/2302428‑2302711                                                                                                                                                  |                                                                                                                                           acatcggcgctgatcctcctgcaatcctgtctgcccgacccttctacaccatcaaccaggacacgccttcggttgacgccctgacccccaccctccagttgatggccggcatcgaagactcgctggacgaatacatctgcgccaaTGCCg                                                                                                                                        >  2:192065‑M1/146‑150 (MQ=255)             ggTCGCAGAGGGCCGCAACATGGCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCaa                                                                                                                            >  1:239141/1‑150 (MQ=255)                 gCAGAGGGCCGCAACATGGCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCg                                                                                                                        <  2:68742/150‑1 (MQ=255)                 gCAGAGGGCCGCAACATGGCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCg                                                                                                                        >  2:548977/1‑150 (MQ=255)                     agGGCCGCAACATGGCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCa                                                                                                                    <  2:239141/150‑1 (MQ=255)                       ggCCGCAACATGGCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAgc                                                                                                                  >  1:482590/1‑150 (MQ=255)                          cGCAACATGGCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGct                                                                                                               >  2:454816/1‑150 (MQ=255)                                   gCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTc                                                                                                                         <  1:566492/131‑1 (MQ=255)                                   gCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTc                                                                                                                         >  2:566492/1‑131 (MQ=255)                                     ccGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTg                                                                                                    <  2:482590/150‑1 (MQ=255)                                      cGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGc                                                                                                   >  1:293245/1‑150 (MQ=255)                                       ggCGATTTGGCTGTGATGCTAAGACCCTGGGGCCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCa                                                                                                  <  1:548977/150‑1 (MQ=255)                                             ttGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGAt                                                                                            <  1:454816/150‑1 (MQ=255)                                               caccatcaaccaggacacgccttcggttgacgccctgacccacaccctccagttgatggccggcatcgaagactcgctggacgagtacatctgcgccaaTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGc                                                                                          <  1:575276‑M1/51‑1 (MQ=255)                                                  tgtgATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACt                                                                                       >  2:321425/1‑150 (MQ=255)                                                       tGCGAAGACCATGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGtt                                                                                  >  2:305105/1‑150 (MQ=255)                                                                ccTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCAt                                                                         >  2:249002/1‑150 (MQ=255)                                                                 cTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATg                                                                        <  1:297055/150‑1 (MQ=255)                                                                  ggggggCGCTTCGCACTCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGt                                                                       <  2:139029/149‑1 (MQ=255)                                                                   gggggCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGtt                                                                      <  2:293245/150‑1 (MQ=255)                                                                           ttCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGctc                                                                                                              >  1:393529/1‑102 (MQ=255)                                                                           ttCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGctc                                                                                                              <  2:393529/102‑1 (MQ=255)                                                                           tccGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCgg                                                              <  1:305105/148‑1 (MQ=255)                                                                            tCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCggg                                                             <  1:54416/150‑1 (MQ=255)                                                                                    cGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCgg                                                     >  2:148429/1‑150 (MQ=255)                                                                                      ccacaccctccagttgatggccggcatcgaagactcgctggacgaatacatctgcgccaaTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCa                                                   >  2:411206‑M1/61‑150 (MQ=255)                                                                                         caccctccagttgatggccggcatcgaagactcgctggacgagtacatctgcgccaaTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCATTg                                                >  2:575276‑M1/58‑150 (MQ=255)                                                                                          cgACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGAc                                                                               >  2:147825/1‑118 (MQ=255)                                                                                          cgACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGAc                                                                               <  1:147825/118‑1 (MQ=255)                                                                                           gACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCATTGgc                                              >  2:167892/1‑150 (MQ=255)                                                                                              acaAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCATTGGCGCa                                           <  1:148429/150‑1 (MQ=255)                                                                                                                          cAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCATTGGCGCAGATGTATTCGTCCAGCGAGTCTTCGATg               <  1:249002/150‑1 (MQ=255)                                                                                                                                       tttCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCATTGGCGCAGATGTATTCGTCCAGCGAGTCTTc                   <  1:572593/133‑1 (MQ=255)                                                                                                                                       tttCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCATTGGCGCAGATGTATTCGTCCAGCGAGTCTTc                   >  2:572593/1‑133 (MQ=255)                                                                                                                                       tttCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCATTGGCGCAGATGTATTCGTCCAGCGAGTCTTCGATGCCGGCCATCAACt  >  2:119998/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                           CCTTGCCGGACCGGTCGCAGAGGGCCGCAACATGGCCCGGCGATTTGGCTGTGATGCGAAGACCCTGGGGGCGCTTCGCACCCCGATCGCGACACAAGGCCGCTCCTACAAAGGCTGCAATCAGCGCAGGGTGATTTCCCCGGTCTGCCGGTGTAGCAGCAACTCGGCCAGCGCTCTGGTCATCTGCACGTGATGCACTGCGTTGACCAGCATGTTGATACCGGGTTCACCGGCATTGGCGCAGATGTATTCGTCCAGCGAGTCTTCGATGCCGGCCATCAACT  >  NC_002947/2302428‑2302711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.