| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2498522 | 26 (1.120) | 5 (0.230) | 4/238 | NT | 17.6% | coding (380/2454 nt) | PP_2193 | ferric siderophore receptor |
| ? | NC_002947 | = 2498539 | 22 (1.000) | coding (397/2454 nt) | PP_2193 | ferric siderophore receptor | |||||
CTGTACACCACAGGCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGTGGACCAGCAGCAATTGCGCGAGCAGATCGACAGCGGCGTCA > NC_002947/2498383‑2498671 | ctgTACACCACAGGCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAaggccgag < 2:320104/150‑1 (MQ=255) accacAGGCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGgccgcg > 2:231247/1‑150 (MQ=255) cacaGGCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCc < 1:563848‑M2/150‑2 (MQ=255) gCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGgcgcggcctcggccttgcgcagg < 1:448490‑M1/150‑24 (MQ=255) gCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAAc > 1:367622/1‑150 (MQ=255) ccGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCGCCCTGCGCACGGCTTAGGCCGCGCCGCAGGCGGTCAAcc > 1:157070/1‑150 (MQ=255) aGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGc < 1:488476/150‑1 (MQ=255) ccGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGaa < 1:169620/150‑1 (MQ=255) cGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAaggc < 2:452511/109‑1 (MQ=255) cGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAaggc > 1:452511/1‑109 (MQ=255) aGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGgcgcggcctcggccttgcgcagggtgacgg < 2:512298‑M1/124‑31 (MQ=255) aGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGgcgcggcctcggccttgcgcagggtgacgg > 1:512298‑M1/1‑94 (MQ=255) ggCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAaggccgag < 1:507586/102‑1 (MQ=255) ggCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAaggccgag > 2:507586/1‑102 (MQ=255) ggCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGcc > 1:132494/1‑150 (MQ=255) tgtCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAg > 2:366176/1‑150 (MQ=255) ccTGCAGCAGTTGCTGGCCGGCAGCGGCATCAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGGTCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCac < 2:28725/150‑2 (MQ=255) tGGCCGGCAGCGGCATGAGCTGGCAGTTCCGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGGGAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGa > 2:113799/1‑150 (MQ=255) tGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGgcgcggcctcggccttgcgcagg < 2:77414‑M1/78‑24 (MQ=255) tGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGgcgcggcctcggccttgcgcagg > 1:77414‑M1/1‑55 (MQ=255) tGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGaa > 1:396285/1‑101 (MQ=255) tGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGaa < 2:396285/101‑1 (MQ=255) tGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGACATCCCCGGGa > 2:265781/1‑150 (MQ=255) gCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCt < 2:155791/150‑1 (MQ=255) cATGAGCTGGCAGGTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGt < 1:1212/150‑1 (MQ=255) aTGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGTg < 1:234221/150‑1 (MQ=255) cTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGAAGCTCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGTGGACca < 1:231247/150‑1 (MQ=255) gCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGTGGACcagca > 1:514123/1‑150 (MQ=255) aGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGTGGACCAGCAGCAATTg > 1:128525/1‑150 (MQ=255) aCCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGTGGACCAGCAGCAATTGCGCGAGCAGATc < 1:265781/150‑1 (MQ=255) ccGTCACCCTGCGCAAGGCCGAGGCCGCGCcgcagggtgacggtgcgagcctcgctgaactgccagctcatgccgctgccggccagcaactgctgcagggcctgctcgacactgtagttgccct < 2:512298‑M2/124‑95 (MQ=255) ccGTCACCCTGCGCAAGGCCGAGGCCGCGCcgcagggtgacggtgcgagcctcgctgaactgccagctcatgccgctgccggccagcaactgctgcagggcctgctcgacactgtagttgccct > 1:512298‑M2/1‑30 (MQ=255) ccTGCGCAAGGCCGAGGCCGCGCcgcagggtgacggtgcgagcctcgctgaactgccagctcatgccgctgccggccagcaactgctgcagggcctgctcgacactgtagttgccctgcaacgccgggctgacctggccggcgacatcgc < 1:448490‑M2/150‑128 (MQ=255) ccTGCGCAAGGCCGAGGCCGCGCcgcagggtgacggtgcgagcctcgctgaactgccagctcatgccgctgccggcca < 2:77414‑M2/78‑56 (MQ=255) ccTGCGCAAGGCCGAGGCCGCGCcgcagggtgacggtgcgagcctcgctgaactgccagctcatgccgctgccggcca > 1:77414‑M2/1‑23 (MQ=255) ccTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGTGGACCAGCAGCAATTGCGCGAg < 2:546971/136‑1 (MQ=255) ccTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGTGGACCAGCAGCAATTGCGCGAg > 1:546971/1‑136 (MQ=255) ggcgcggcctcggccttgcgcagggtgacggtgcgagcctcgctgaactgccagctcatgccgctgccggccagcaactgctgcagggcctgctcgacactgtagttgccctgcaacgccgggctgacctggccggcgacatcgcctgtg < 1:563848‑M1/150‑150 (MQ=255) | CTGTACACCACAGGCGATGTCGCCGGCCAGGTCAGCCCGGCGTTGCAGGGCAACTACAGTGTCGAGCAGGCCCTGCAGCAGTTGCTGGCCGGCAGCGGCATGAGCTGGCAGTTCAGCGAGGCTCGCACCGTCACCCTGCGCAAGGCCGAGGCCGCGCCGCAGGCGGTCAACCTCAAGCCGATCGAAGTCAGCGTAGCCTCGCGCACCAGCACCGCCATCAGCGAAATCCCCGGGACCGTCTGGGTAGTGGACCAGCAGCAATTGCGCGAGCAGATCGACAGCGGCGTCA > NC_002947/2498383‑2498671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |