| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3068864 | 27 (1.170) | 4 (0.180) | 4/234 | NT | 12.1% | intergenic (+72/‑91) | qedH‑II/aldB‑II | quinoprotein ethanol dehydrogenase/aldehyde dehydrogenase |
| ? | NC_002947 | = 3068889 | 33 (1.530) | intergenic (+97/‑66) | qedH‑II/aldB‑II | quinoprotein ethanol dehydrogenase/aldehyde dehydrogenase | |||||
AGGGCGGCATGCTCTGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTATCCTTCAAACCCCGT > NC_002947/3068725‑3069008 | aGGGCGGCATGCTCTGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGAt < 1:363602/150‑1 (MQ=255) tCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCgtgccgggcgaatgcatcgttggcagcgggg > 1:94645‑M1/1‑119 (MQ=255) cAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGTGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGAGCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACgcggggc > 2:59726‑M2/1‑143 (MQ=255) gTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCgtgccgggcgaatgcatcgttggcagcggggctct < 2:94645‑M1/150‑36 (MQ=255) cAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCgg < 1:116909/150‑1 (MQ=255) aGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGt < 2:12191/150‑1 (MQ=255) caAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCgtc < 2:91266/150‑3 (MQ=255) gCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCgg > 2:66556/1‑112 (MQ=255) gCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCgg < 1:66556/112‑1 (MQ=255) tgcctACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCgtgccgggcgaatgcatcgttggcagcggggctctcgtcatttg > 1:259392‑M1/1‑68 (MQ=255) tgcctACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCgtgccgggcgaatgcatcgttggcagcggggctctcgtcatttg < 2:259392‑M1/112‑45 (MQ=255) tgcctACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACAAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCaga > 1:53972/1‑150 (MQ=255) ttGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTgg > 1:190343/1‑117 (MQ=255) ttGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTgg < 2:190343/117‑1 (MQ=255) tgcCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTAc > 2:20135/1‑150 (MQ=255) gCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGcc < 1:49806/101‑1 (MQ=255) gCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGcc > 2:49806/1‑101 (MQ=255) gATCGGTGGCAAGCGGCCCTACTACCAAATGACGAAACCCACGCTGCCCCAGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAAc > 1:415108/1‑150 (MQ=255) aaGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTggg < 1:402443/97‑1 (MQ=255) aaGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTggg > 2:402443/1‑97 (MQ=255) aaGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGAAACTGGCAGTGAACCGAAAGTGCTCGGCAATATCTACGCACAACCCGGAACTcc > 2:469008/1‑150 (MQ=255) aGCGGCCCTACTGCCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCa < 2:573773/150‑1 (MQ=255) gCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAg < 1:122438/150‑1 (MQ=255) cGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAAGGCATCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAgg < 1:469008/150‑1 (MQ=255) gCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTg < 1:8748/90‑1 (MQ=255) gCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTg > 2:8748/1‑90 (MQ=255) cccTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAAccc > 2:518551/1‑136 (MQ=255) cccTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAAccc < 1:518551/136‑1 (MQ=255) ctacCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCagag < 2:340678/106‑1 (MQ=255) ctacCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCagag > 1:340678/1‑106 (MQ=255) cAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACgcggggctctcgtcatttggtagtagggccgcttgccaccgatcagcggcagcaagcggcagtaggca < 2:259392‑M2/112‑69 (MQ=255) cAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACgcggggctctcgtcatttggtagtagggccgcttgccaccgatcagcggcagcaagcggcagtaggca > 1:259392‑M2/1‑44 (MQ=255) agagCCCCGCTGCCAACGATGCATTCGCCCGGCACgcggggctctcgtcatttggtagtagggccgcttgccaccgatcagcggcagcaagcggcagtaggcaggcgttatggcttgacgcttgccgtttgctgcaactgcttgggcaac < 2:94645‑M2/150‑116 (MQ=255) gCCCCGCgtgccgggcgaatgcatcgttggcagcggggctctcgtcatttggtagtagggccgcttgccaccgctcagcggcagcaagcggcagtaggcaggcgttatggcttgacacttgccgtttgctgcaactgcttgggcaacttg > 2:59726‑M1/1‑7 (MQ=255) ccccGCTGCCAACGATGCATTCGCCCGGCACgcggggctctcgtcatttggtagtagggccgcttgccaccgatcagcggcagcaagcggcagtaggcaggcgttatggcttgacgcttgccgtttgctgcaactgcttgggcaacttga > 1:94645‑M2/1‑31 (MQ=255) ccccGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTc < 2:390958/93‑1 (MQ=255) ccccGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTc > 1:390958/1‑93 (MQ=255) | AGGGCGGCATGCTCTGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAACGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCGGGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTATCCTTCAAACCCCGT > NC_002947/3068725‑3069008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |