| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3759163 | 18 (0.780) | 3 (0.140) | 3/240 | NT | 14.9% | coding (385/612 nt) | PP_3323 | CobW/P47K family protein |
| ? | NC_002947 | = 3759191 | 17 (0.770) | coding (413/612 nt) | PP_3323 | CobW/P47K family protein | |||||
GGCTGCATTTGCTGCACCTTGCGCGAAGACCTTCTGCTCGAAGTGGACCGTCTAGCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCACGCGGTGAATCGCTGGGCGAGGAAGACGTGCGCACCGTGGTCGAC > NC_002947/3759016‑3759312 | ggCTGCATTTGCTGCACCTTGCGCGAAGACCTTCTGCTCGAAGTGGACCGTCTAGCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGAt < 1:89040/150‑1 (MQ=255) gCATTTGCTGCACCTTGCGCGAAGACCTTCTGCTCGAAGTGGACCGTCTAGCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGcc < 2:601476/150‑1 (MQ=255) tgcACCTTGCGCGAAGACCTTCTGCTCGAAGTGGACCGTCTAGCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTc > 1:365919/1‑150 (MQ=255) ttCTGCTCGAAGTGGACCGTCTAGCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGcgtgccacttcgctgaggctacggccatcctcg > 2:35168‑M1/1‑117 (MQ=255) tCTGCTCGAAGTGGACCGTCTAGCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGcgtgccacttcgctgaggctacggccatcctcgc < 2:157360‑M1/150‑35 (MQ=255) cTGCTCGAAGTGGACCGTCTAGCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGcgtgccacttcgctgaggctacggccatcctcgcc < 1:35168‑M1/150‑36 (MQ=255) cTGCTCGAAGTGGACCGTCTAGCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGac > 1:14339/1‑150 (MQ=255) gCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGAt < 1:606385/150‑1 (MQ=255) aaaGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGcc > 2:273838/1‑150 (MQ=255) agagGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCtt < 2:365919/150‑1 (MQ=255) aaTTGGTCATCGAACCGCCGGGCACCGCCTATCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACt < 2:296831/150‑1 (MQ=255) tCATCGAATCGACGGGCATCTCAGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAACTGGCACGCCTCGACACCATGGTCACCCTGGTAGATGCCTTCCATTTCCTGCGCGACTTCAGCt > 2:153815/1‑150 (MQ=255) ggCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCCTCAGTGTCCTGCGCGACTACAGCGCGCGCGACAGCCTg < 1:273838/150‑1 (MQ=255) tcCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCa > 1:212671/1‑150 (MQ=255) gAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCAcgc > 1:244101/1‑150 (MQ=255) aCTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGAt > 2:97323/1‑94 (MQ=255) aCTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGAt < 1:97323/94‑1 (MQ=255) cttcaccttcGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCACGCGGTGAATCGCTGGGCGAGGAAGa > 2:82489/1‑150 (MQ=255) caccttcGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCACGCGGTGAATCGCTGGGCGAGGAAGACGt < 1:82489/150‑1 (MQ=255) tcGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCACGCGGTGAATCGCTGGGCGAGGAAGACGTGCGCa < 2:244101/150‑1 (MQ=255) ggCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGcctcgccttcgaaggtgaaggtttccgccaccggcagtggctcggagatgcccgtcgattcgatgaccaattggtcgaaacgaccctctttggctagacggtccacttcgagcag < 1:35168‑M2/150‑116 (MQ=255) gCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGcctcgccttcgaaggtgaaggtttccgccaccggcagtggctcggagatgcccgtcgattcgatgaccaattggtcgaaacgaccctctttggctagacggtccacttcgagcaga < 2:157360‑M2/150‑117 (MQ=255) gCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCACGCGGTGAATCGCTGGGCGAGGAAGACGTGCGCACCGTgg > 1:456474/1‑150 (MQ=255) gCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCACGCGGTGAATCGCTGGGCGAGGAAGACGTGCGCACCGTgg > 1:204338/1‑150 (MQ=255) cGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGcctcgccttcgaaggtgaaggtttccgccaccggcagtggctcggagatgcccgtcgattcgatgaccaattggtcgaaacgaccctctttggctagacggtccacttcgagcagaa > 2:35168‑M2/1‑33 (MQ=255) gATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCACGCGGTGAATCGCTGGGCGAGGAAGACGTGCGCACCGTGGTCGAc < 2:204338/150‑1 (MQ=255) | GGCTGCATTTGCTGCACCTTGCGCGAAGACCTTCTGCTCGAAGTGGACCGTCTAGCCAAAGAGGGTCGTTTCGACCAATTGGTCATCGAATCGACGGGCATCTCCGAGCCACTGCCGGTGGCGGAAACCTTCACCTTCGAAGGCGAGGATGGCCGTAGCCTCAGCGAAGTGGCACGCCTCGACACCATGGTCACCGTGGTCGATGCCTTCAATTTCCTGCGCGACTACAGCTCGCGCGACAGCCTGCAGGCACGCGGTGAATCGCTGGGCGAGGAAGACGTGCGCACCGTGGTCGAC > NC_002947/3759016‑3759312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |