| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 401375 = | 22 (0.950) | 9 (0.410) | 6/238 | NT | 36.8% | coding (958/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | 3968935 = | 10 (0.450) | coding (1019/1179 nt) | PP_3498 | transposase | |||||
GCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGCTA > NC_002947/401253‑401523 | gCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCt < 1:114312/150‑1 (MQ=31) tgatgaTCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTggg < 2:291502/150‑1 (MQ=32) ttGAGCCAGCTAAGGCCTGATTCCGATCAGACAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCACGTTTAc < 2:214295/150‑1 (MQ=17) gcccatataatccgcagatttcgattagccagcctgatcgccgcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaggCTGGCTAATc > 1:283205‑M1/93‑102 (MQ=255) gcccatataatccgcagatttcgattagccagcctgatcgccgcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaggCTGGCTAATc < 2:283205‑M1/10‑1 (MQ=255) ccAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATTTGGGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACg > 1:503827/1‑150 (MQ=17) cgcagatttcgattagccagcctgatcgccgcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcatCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAg > 2:511204‑M1/80‑130 (MQ=255) cgcagatttcgattagccagcctgatcgccgcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcatCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAg < 1:511204‑M1/51‑1 (MQ=255) gcagatttcgattagccagcctgatcgccgcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcatc < 1:425021‑M1/1‑1 (MQ=255) gcagatttcgattagccagcctgatcgccgcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcatc > 2:425021‑M1/79‑79 (MQ=255) tGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaacga > 1:470262/1‑150 (MQ=32) cAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggcgg < 2:470262/150‑1 (MQ=32) cAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggcgg < 2:615099/150‑1 (MQ=32) gatCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCgg > 1:325931/1‑139 (MQ=33) gatCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCgg < 2:325931/139‑1 (MQ=33) gccgccTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATc < 1:301116/102‑1 (MQ=33) gccgccTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATc > 2:301116/1‑102 (MQ=33) ccgccTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACg > 2:328176/1‑114 (MQ=33) ccgccTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACg < 1:328176/114‑1 (MQ=33) gcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaggCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCaa < 1:48391‑M1/60‑1 (MQ=255) gcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaggCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCaa > 2:48391‑M1/51‑110 (MQ=255) gcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaggCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAAGCGGCTATGAGCctct < 2:128313‑M1/100‑1 (MQ=255) gcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaggCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCctct < 2:546505‑M1/100‑1 (MQ=255) ctctTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa < 2:503827/150‑1 (MQ=32) tctTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAc > 1:361013/1‑150 (MQ=32) tccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaggCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAc < 1:448021‑M1/103‑1 (MQ=255) tccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcatCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGaaaa > 1:601899‑M1/47‑123 (MQ=255) tccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcatCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGaaaa < 2:601899‑M1/77‑1 (MQ=255) cccGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGcc > 1:426821/1‑150 (MQ=32) ccGCTTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCa > 2:154790/1‑150 (MQ=17) gggCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGgc < 2:361013/150‑1 (MQ=32) gcgcAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGgcgc < 1:66685/150‑1 (MQ=32) aaGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAgg > 2:370694/1‑150 (MQ=32) gaggCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGgcgc < 2:616201/150‑1 (MQ=32) gATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAAccc > 1:128706/1‑150 (MQ=32) gctggctAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGCTa > 1:486753/1‑150 (MQ=32) | GCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGCTA > NC_002947/401253‑401523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |