New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1837562 = | 30 (1.300) | 5 (0.220) | 5/242 | NT | 14.7% | coding (139/672 nt) | PP_1642 | hypothetical protein |
? | NC_002947 | 1837587 = | 29 (1.300) | coding (164/672 nt) | PP_1642 | hypothetical protein |
TCTGAGCCCATGCGTGATTACCAGTGGTTGCATGAGTATTGCCTGAACCGCTTTGGTTCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTGGAGCGGTTGATGCAGGATGAG > NC_002947/1837415‑1837705 | tgagcttgcccaggtggcggataatgcgctcatcctgcatcaaccgctccagatgctcggcgcccatcagcaccactttctccgggtcgaagccaaagaacacctgctcgaacgccggccacttggcatccaccaggctgtgcttgaGcc < 2:454003‑M1/3‑1 (MQ=255) gagcttgcccaggtggcggataatgcgctcatcctgcatcaaccgctccagatgctcggcgcccatcagcaccactttctccgggtcgaagccaaagaacacctgctcgaacgccggccacttggcatccaccaggctgtgcttgaGccc < 1:115110‑M1/4‑1 (MQ=255) ccAGTGGTTGCATGAGTATTGCCTGAACCGCTTTGGTTCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCggg > 1:156118/1‑150 (MQ=255) cAGTGGTTGCATGAGTATTGCCTGAACCGCTTTGGTTCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCgggg < 2:598881/150‑1 (MQ=255) tGCATGAGTATTGCCTGAACCGCTTTGGTTCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGAAGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGATCACGc > 1:282161/1‑150 (MQ=255) gAGTATTGCCTGAACCGCTTTGGTTCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGc > 1:569411/1‑150 (MQ=255) ccggAACCGCTTGGGTTCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCGGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGa < 2:525057/147‑1 (MQ=255) ccTGAACCGCTTTGGTTCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGa > 1:7733/1‑150 (MQ=255) gTTCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCgg > 2:115110/1‑150 (MQ=255) ttCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCaa > 2:288072/1‑141 (MQ=255) ttCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCaa < 1:288072/141‑1 (MQ=255) ttCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGc > 2:213182/1‑150 (MQ=255) cGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGt < 1:162584/150‑1 (MQ=255) cccAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCg > 1:177813/1‑150 (MQ=255) cAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAg > 1:524915/1‑150 (MQ=255) gcgcTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAg < 1:272296/150‑1 (MQ=255) cTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTg < 2:569411/150‑1 (MQ=255) tGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCg > 1:176176/1‑150 (MQ=255) cGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGAcc > 1:242939/1‑150 (MQ=255) cGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGAcc < 2:176176/150‑1 (MQ=255) gCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCgg < 2:95000/80‑1 (MQ=255) gCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCgg > 1:95000/1‑80 (MQ=255) gCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAgtggt < 2:524915/150‑1 (MQ=255) gcAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGAt < 2:24439/150‑1 (MQ=255) ctaCATCAGTTACGACCGCTACCTGTCGACATTGGCGCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGTCCCGGAGAAAGTGGTGCTGATGTGCGCCGa < 2:282161/148‑1 (MQ=255) cacttggcatccaccaggctgtgcttgaGCCCCGCGCG‑GAACACGCGCAGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTc < 2:463095‑M1/84‑1 (MQ=255) cacttggcatccaccaggctgtgcttgaGCCCCGCGCG‑GAACACGCGCAGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTc > 1:463095‑M1/29‑112 (MQ=255) gTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTgg > 1:4122/1‑150 (MQ=255) cGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGGGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTGGAGCGGTTg > 2:481775/1‑150 (MQ=255) accaggctgtgcttgaGCCCTGCGCGTGTTC‑CGCGCGGGGc > 2:282466‑M1/17‑41 (MQ=255) accaggctgtgcttgaGCCCTGCGCGTGTTC‑CGCGCGGGGc < 1:282466‑M1/25‑1 (MQ=255) accaggctgtgcttgaGCCCCGCGCG‑GAACACGCGCAGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTGGAGCGGTTGAt < 2:270587‑M1/134‑1 (MQ=255) ccTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTGGAGCGGTTGATGCa < 2:177813/150‑1 (MQ=255) tCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGAAGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTGGAGCGGTTGATGCAGGAt < 1:345980/150‑1 (MQ=255) gACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAGGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTGGAGCGGTTGATGCAGGATGa < 2:156118/150‑1 (MQ=255) aCATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTGGAGCGGTTGATGCAGGATGAg > 2:504857/1‑150 (MQ=255) aCATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTGGAGCGGTTGATGCAGGATGAg > 1:454003/1‑150 (MQ=255) | TCTGAGCCCATGCGTGATTACCAGTGGTTGCATGAGTATTGCCTGAACCGCTTTGGTTCGGCCCAGGCGCTGGAGGCTTTCCTGCCGCAGCCGCGCACGCCGGCGCAACTGCGCGACATCAGTGACGACCGCTACCTGTCGACATTGGCCCTGCGCGTGTTC‑CGCGCGGGGCTCAAGCACAGCCTGGTGGATGCCAAGTGGCCGGCGTTCGAGCAGGTGTTCTTTGGCTTCGACCCGGAGAAAGTGGTGCTGATGGGCGCCGAGCATCTGGAGCGGTTGATGCAGGATGAG > NC_002947/1837415‑1837705 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |