| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2049163 | 24 (1.040) | 6 (0.270) | 6/242 | NT | 21.7% | coding (152/372 nt) | PP_1822 | hypothetical protein |
| ? | NC_002947 | = 2049187 | 20 (0.890) | coding (128/372 nt) | PP_1822 | hypothetical protein | |||||
TCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATC > NC_002947/2049019‑2049312 | tcttcAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCg > 1:440232/1‑150 (MQ=255) ttcAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTGTTGGCGGCGCGCAGGGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTg > 2:178147/1‑150 (MQ=255) ttcAATGCACAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTg < 1:115403/150‑1 (MQ=255) tcAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCtggcgctg > 2:582026‑M1/1‑142 (MQ=255) cgcAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTgg < 1:162474/150‑1 (MQ=255) cgcAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTgg < 1:213059/150‑1 (MQ=255) tGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACa < 2:68627/146‑1 (MQ=255) tGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACa > 1:68627/1‑146 (MQ=255) cACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCCGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCtggcgctgtaccagttccacgcctg < 1:121363‑M1/150‑26 (MQ=255) aCCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTg < 1:155564/150‑1 (MQ=255) cccGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCtggcgctgtaccagttccacgcctgcccgttct < 1:582026‑M1/150‑34 (MQ=255) ccGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGc > 1:26516/1‑150 (MQ=255) cGGCCGCCGCCTTCGTGCAGGGCCTGGCGGTGCATTGAGTCGTTCTTGGCGTCGCGCAGCGTCACCGCCACGTTCAAGCGTTGCTGTGTTCGGCGGGTTTTGACACAGAACGGGCtggcgctgtaccagttccacgcctgcccgttctgt < 2:590470‑M1/150‑36 (MQ=255) gccACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAg < 1:379516‑M2/135‑2 (MQ=255) gccACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAg > 2:379516‑M2/1‑134 (MQ=255) cACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCt > 2:121683/1‑150 (MQ=255) tGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTAAGTTCACAGAACGGGCAGGCGTGGCACTGGTCCGGCGCCTGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGggcg > 1:292217/1‑150 (MQ=255) gTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCtggcgctgtaccagttccacgcctgcccgtt > 2:562865‑M1/1‑86 (MQ=255) gTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCtggcgctgtaccagttccacgcctgcccgtt < 1:562865‑M1/117‑32 (MQ=255) gCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGt < 2:190812/150‑1 (MQ=255) cTTGGCGTCGCGCAGCGCACCCGGAACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCtt < 2:440232/150‑1 (MQ=255) tGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTgg < 2:26516/150‑1 (MQ=255) cgcgCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGggc < 1:269954/150‑1 (MQ=255) gcCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATc < 1:121683/150‑1 (MQ=255) aCGTTCAAGCGGTGCAGTGTGCGGCCGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCg > 1:78149/1‑150 (MQ=255) gCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGAt > 2:550841/1‑150 (MQ=255) gtgtGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATg > 2:200029/1‑77 (MQ=255) gtgtGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATg < 1:200029/77‑1 (MQ=255) tgCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGa < 1:178147/150‑1 (MQ=255) cggcggGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAgg < 1:370901/150‑1 (MQ=255) ggTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGcc > 2:307906/1‑103 (MQ=255) ggTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGcc < 1:307906/103‑1 (MQ=255) acaGAACGGGCAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgaacacagcaacgcttgaacgtggcggtgacgctgcgcgacgccaagaacgactcaatgcaccgccaggccctgcacgaaggcggcggccg < 2:590470‑M2/150‑116 (MQ=255) acaGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGc > 2:19411/1‑150 (MQ=255) aGAACGGGCAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcaccgccaggccctgcaggaaggtggcggccggg < 1:582026‑M2/150‑118 (MQ=255) aaCGGGCAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcac < 1:562865‑M2/117‑87 (MQ=255) aaCGGGCAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcac > 2:562865‑M2/1‑31 (MQ=255) gCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGAt < 2:292217/150‑1 (MQ=255) ctggcgctgtaccagttccacgcctgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcaccgccaggccctgcaggaaggtggc > 2:379516‑M1/1‑1 (MQ=255) ctggcgctgtaccagttccacgcctgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcaccgccaggccctgcaggaaggtggc < 1:379516‑M1/135‑135 (MQ=255) cAGGCGTGGAACTGGTACAGCGCCAgcccgttctgtgtcaaaacccgccgcacactgcaccgcttgaacgtgccggtggcgctgcgcgacgccaagaacgacccggtgcacggccaggccctgcaggaaggtggcggccgggtgaaagtg < 1:121363‑M2/150‑126 (MQ=255) | TCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGGCCTGGCGGTGCACCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGCCAACCCGCAGGGCTTTGACGATC > NC_002947/2049019‑2049312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |