New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2143400 = | 23 (1.000) | 4 (0.180) | 4/238 | NT | 16.4% | coding (137/435 nt) | PP_1899 | ExbD/TolR family protein |
? | NC_002947 | 2143445 = | 19 (0.860) | coding (182/435 nt) | PP_1899 | ExbD/TolR family protein |
GTCGACATCAACCTGGCGTCGCTGATCGACGTGGTGTTCGTCCTGCTGCTGTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAGGCCATAGAGCGCGAGTCGGGCGGCGACAACAAGTTGCCGCTGGCCATCAGCGCCGACGG > NC_002947/2143297‑2143592 | gTCGACATCAACCTGGCGTCGCTGATCGACGTGGTGTTCGTCCTGCTGCTGTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAg > 1:172787/1‑150 (MQ=255) aTCAACCTGGCGTCGCTGATCGACGTGGTGTTCGTCCTGCTGCTGTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCtggtg < 2:93820/150‑1 (MQ=255) ggtgTTCGTCCTGCTGCTGTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCgt < 1:180258/150‑1 (MQ=255) gtTCGTCCTGCTGCTGTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTa > 1:563232/1‑150 (MQ=255) gTCCTGCTGCTGTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCg > 1:426702/1‑150 (MQ=255) ccTGCGGCTGTTCTTCGTGGTTACCACACCCTTCCCCCGCGACACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGt < 2:563232/150‑1 (MQ=255) tgctgctgTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGa > 1:82430/1‑150 (MQ=255) ctgTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGaacaac < 2:82430/150‑1 (MQ=255) ctgTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGaacaac < 1:442140/150‑1 (MQ=255) gttgttcaccgaatacacgccttcggcgctgatggtgatttccaccagctTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCtggt > 1:353331‑M1/51‑102 (MQ=255) gttgttcaccgaatacacgccttcggcgctgatggtgatttccaccagctTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCtggt < 2:353331‑M1/52‑1 (MQ=255) ttcGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCCCCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACctg < 1:104236/150‑1 (MQ=255) ccaccTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCt > 1:238115/1‑85 (MQ=255) ccaccTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCt < 2:238115/85‑1 (MQ=255) accTTCACCCGGCAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGAc < 1:402981/150‑1 (MQ=255) cTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCAGGGAAGGCTGGGGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCt > 2:511898/1‑150 (MQ=255) ttCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTg < 2:202061/150‑1 (MQ=255) cccGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCa > 2:15787/1‑150 (MQ=255) ccGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGCACAACCACCTGCTGCCCAAAAGCGACCTGGCCAc > 2:240172/1‑150 (MQ=255) ccGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGa < 1:181959/141‑1 (MQ=255) ccGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGa > 2:181959/1‑141 (MQ=255) aaaCGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGa > 1:551414/1‑150 (MQ=255) cAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAg < 1:589312/150‑1 (MQ=255) accagcttgcccgggtcggccggcgccggctcggcgctggtggcttcgggcaAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGaacaac < 2:353331‑M2/50‑1 (MQ=255) accagcttgcccgggtcggccggcgccggctcggcgctggtggcttcgggcaAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGaacaac > 1:353331‑M2/53‑102 (MQ=255) ccgggtcggccggcgccggctcggcgctgatggcttcgggcaAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAGGCCATAGAGCGCGAGTCgg > 1:113970‑M2/43‑150 (MQ=255) cggcgccggctcggcgctggtggcttcgggcaAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAGGCCATAGAGCGCGAGTCGGGCGGCGacaa < 2:113970‑M2/118‑1 (MQ=255) cgcCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAGGCCATAGAGCGCGAGTCGGGCGGCGAcaacaa < 1:15787/150‑1 (MQ=255) caAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAGGCCATAGAGCGCGAGTCGGGCGGCGACAACAAGTTGCCGCTGGCCATCAGCGCCGACgg < 1:464463‑M2/148‑1 (MQ=255) | GTCGACATCAACCTGGCGTCGCTGATCGACGTGGTGTTCGTCCTGCTGCTGTTCTTCGTGGTTACCACCACCTTCACCCGCGAAACGCAACTTCGCGTCGAGCTGCCCGAAGCCACCAGCGCCGAGCCGGCGCCGGCCGACCCGGGCAAGCTGGTGGAAATCACCATCAGCGCCGAAGGCGTGTATTCGGTGAACAACCACCTGCTGCCCAAAAGCGACCTGGCCACCCTGAGCGAGGCCATAGAGCGCGAGTCGGGCGGCGACAACAAGTTGCCGCTGGCCATCAGCGCCGACGG > NC_002947/2143297‑2143592 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |