New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 195644 | 33 (1.430) | 9 (0.390) | 6/248 | NT | 21.5% | coding (1150/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | = 196261 | 33 (1.440) | coding (1767/26049 nt) | PP_0168 | putative surface adhesion protein |
TACAACAACGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGC > NC_002947/196115‑196404 | tACAACAACGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTc > 1:187334/1‑150 (MQ=255) tACAACAACGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTc > 1:22685/1‑150 (MQ=255) caacGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGa > 1:367003/1‑150 (MQ=255) aacGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGaa > 2:584870/1‑150 (MQ=255) aacGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGCTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGaa > 2:447114/1‑150 (MQ=255) ggTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggc < 1:491838/150‑1 (MQ=255) tCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc < 2:22685/150‑1 (MQ=255) gCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACtt > 1:149559/1‑150 (MQ=255) aCCATCGAGAACGCCACGGGCGGTAATTTCGAGCACCTGACCCCGAACCCGACGGCGGCAGAGACGACGATCGACGACTCGTTCGACACCACTACCGCGACACTGACGGAAAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTAACAcc > 2:40475/1‑150 (MQ=14) aTCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACCCGGTCGACACCACTACCGCAACCCGGCAGGCGAGCCCGTCGGGCACCGAAGACGGCGCGAGCACTTACGCCGta > 2:272647/1‑149 (MQ=14) aaCGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCAAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTCACACCGTGACCCTg > 2:32173/1‑150 (MQ=255) gCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTg < 1:77184/150‑1 (MQ=255) cTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACa < 2:546112/150‑1 (MQ=39) cTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACa > 1:546112/1‑150 (MQ=39) tGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAACCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAg > 2:85458/1‑150 (MQ=255) gACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGt > 1:345136/1‑150 (MQ=40) cccGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGAc > 2:510674/1‑150 (MQ=255) cGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCCCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCGGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACg < 1:272647/150‑1 (MQ=255) ggCTCAGACCACGATTAAAGAATCGGAAGACAACACTACCGCGACCCTGACGTCGAGCCCGTCGGACACCGAAGGCGGCATGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCCACGGCCa > 2:256377/1‑150 (MQ=14) aaGACCACTATCAACGACTCTGTCGACACCGCTACCGCGACCCTGACAGCTAGCCCGACAGTTACCGAAGGCGGCGTGATCACTTACACCCTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTTTCCAACGGCCAAAcc < 2:116329/149‑1 (MQ=14) aCGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTAcc < 1:510674/150‑1 (MQ=40) cGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGc > 2:210406/1‑150 (MQ=255) gTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGACGCGTGCaaa > 2:44544/1‑150 (MQ=255) tCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCaaga < 1:584870/150‑3 (MQ=38) gACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAAcc > 2:29551/1‑150 (MQ=255) acacCACTACCGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggg > 1:421734‑M2/1‑35 (MQ=255) acacCACTACCGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggg < 2:421734‑M2/85‑51 (MQ=255) acacCACTACCGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccg > 2:535274‑M2/1‑35 (MQ=255) acacCACTACCGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccg < 1:535274‑M2/83‑49 (MQ=255) accacTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAGACCCAg > 2:461637/1‑150 (MQ=21) accaccGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtggtggcatcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgat < 2:92029‑M2/130‑101 (MQ=255) accaccGCGACCCTGACGGCGAGCCCGTCGgggtcgcggtggtggcatcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgat > 1:92029‑M2/1‑30 (MQ=255) cTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGACAAAACCCAGGGCa > 2:170517/1‑150 (MQ=38) tACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGcc < 2:429909/79‑1 (MQ=35) tACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGcc > 1:429909/1‑79 (MQ=38) cgcgACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGt < 2:367003/150‑1 (MQ=35) gcgACCCTGACGGCGAGCACGTCGATCACCGGAGGCGGCGTCATCACTTACACCGTGACCTTGAGCTACCCTGCCCAGACGCCCGTGACGGTGACCGTGTCCAACGGCCAAACGATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTc < 2:77690/150‑1 (MQ=11) cccTGACGGCGAGCCCGTCAgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgatggtgacgctga > 1:611262‑M2/1‑20 (MQ=255) cccTGACGGCGAGCCCGTCAgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgatggtgacgctga < 2:611262‑M2/131‑112 (MQ=255) ccTGACGGCGAGCCCGTCAgggtcgcggtagtggtgtcgaccgagtcgttgatcgtggtctgagccggggtcggattcggggtcagttgctcgaaattaccgcctgtggcgttctcgatggtgacgctgacggtcgaaccgttgttgtag < 2:360543‑M2/150‑132 (MQ=255) cTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAATGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTc < 1:44544/150‑1 (MQ=25) tGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTcc > 2:44349/1‑150 (MQ=35) gAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGAcccc > 1:462057/1‑150 (MQ=35) cccGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGACAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGc < 1:170517/150‑1 (MQ=25) | TACAACAACGGTTCGACGGTCAGCGTCACCATCGAGAACGCCACGGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGTCCAACGGCCAAACCATTACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGC > NC_002947/196115‑196404 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |