New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	595628 =	12 (0.520)	3 (0.130)	3/242	NT	19.6%	coding (529/1266 nt)	PP_0506	ABC transporter permease
	?	NC_002947	595675 =	13 (0.580)					coding (482/1266 nt)	PP_0506	ABC transporter permease

TCCATTCCGCCCAGGCTGATATGCAGGGTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGT  >  NC_002947/595534‑595814                                                                                                                                              |                                                                                                                                            tCCATTCCGCCCAGGCTGATATGCAGGGTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACACAGcaag                                                                                                                                     >  1:434439/1‑147 (MQ=255)    aTTCCGCCCAGGCTGATATGCAGGGTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAg                                                                                                                                  >  1:215972/1‑150 (MQ=255)                                ggTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGa                                                                                                      <  1:297575/150‑1 (MQ=255)                                         gggTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCt                                                                                             >  1:112197/1‑150 (MQ=255)                                                 gTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACggg                                                                                     <  1:189984/150‑1 (MQ=255)                                                 gTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACggg                                                                                     <  2:150004/150‑1 (MQ=255)                                                      ctcggcgctgaagtggccgaggcattgcactacaagctgggTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCa                                                                                                                                          >  1:565425‑M1/42‑92 (MQ=255)                                                      ctcggcgctgaagtggccgaggcattgcactacaagctgggTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCa                                                                                                                                          <  2:565425‑M1/51‑1 (MQ=255)                                                                      aCGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGccct                                                                <  2:215972/150‑2 (MQ=255)                                                                                        tcgtGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGCCCCTGGCTCAGTTGCAGATGc                                              <  1:286127/150‑1 (MQ=255)                                                                                           tgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaCCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAg                                                                                                     >  1:565425‑M2/52‑92 (MQ=255)                                                                                           tgggtgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaCCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAg                                                                                                     <  2:565425‑M2/41‑1 (MQ=255)                                                                                               tgacaagctggtgctggcccacggcgtggccgcaatcagtctggtcaCCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGCCCCTGGCTCAGTTGCAGATGCTggcggc                                       >  1:355860‑M2/48‑150 (MQ=255)                                                                                                          aTTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGa                            >  2:103371/1‑150 (MQ=255)                                                                                                               ggCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATg                       >  2:403874/1‑150 (MQ=255)                                                                                                                 ccACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGc                                                                   >  2:196502/1‑104 (MQ=255)                                                                                                                 ccACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGc                                                                   <  1:196502/104‑1 (MQ=255)                                                                                                                                    cAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGGCGTTGGCAAATGCACGCCCCTGGCTCAGTTACAGATGCTGGCGGCGGCCGTGCTGATAATGGCTGAAGTAATCCgtggtggt  >  1:198019/1‑150 (MQ=255)                                                                                                                                              |                                                                                                                                            TCCATTCCGCCCAGGCTGATATGCAGGGTGCGGTCGACGGGGGTGCCGGTGCGCTTGAGTACGCCGACCACGGTAAACGGCTTGTCGTCGTGCTTGACCAGACTGATTGCGGCCACGCCGTGGGCCAGCACCAGCTTGTCACCCAGCTTGTAGTGCAATGCCTCGGCCACTTCAGCGCCGAGCACTACCTCGAACGGGTCGTTGGCAAACTCACGCCCCTGGCTCAGTTGCAGATGCTGGCGGCGGCCGTACTGATAATGGCTGAAGTAATCCGTGGTGGT  >  NC_002947/595534‑595814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.