New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 837845 | 15 (0.650) | 4 (0.180) | 4/240 | NT | 21.4% | coding (123/585 nt) | pth | peptidyl‑tRNA hydrolase |
? | NC_002947 | = 837864 | 15 (0.680) | coding (104/585 nt) | pth | peptidyl‑tRNA hydrolase |
GGCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCTTGGAGTTGGTGGG > NC_002947/837734‑837996 | ggCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAAc > 2:410864/1‑150 (MQ=255) aCGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGTATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAaga < 2:414586/150‑1 (MQ=255) cTGGCCGCTGCGGTTCATGTAGGTTGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGcccc > 2:340630/1‑150 (MQ=255) gggATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCg > 2:462101/1‑150 (MQ=255) ggATCAACAAACGAACGTCGTTGCCCTGATGGCTGCATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCgg < 1:340630/150‑1 (MQ=255) ggATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCgg > 2:336038/1‑150 (MQ=255) cgtTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGc < 1:462101/150‑1 (MQ=255) aTGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCaa > 2:456295/1‑150 (MQ=255) aTGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGCGGTTACCCAGGCCAACGATCaa < 2:41675/150‑1 (MQ=255) gCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTg < 1:410864/150‑1 (MQ=255) ttAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCg < 1:249915/150‑1 (MQ=255) ccGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAggg > 1:573476/1‑150 (MQ=255) ttttGTCAGCGGTCAGCGAAACACGCTGGGcgctgacaaaaagtatttcggcctgacggctaaattcagccatcaggg < 2:574644‑M2/78‑49 (MQ=255) ttttGTCAGCGGTCAGCGAAACACGCTGGGcgctgacaaaaagtatttcggcctgacggctaaattcagccatcaggg > 1:574644‑M2/1‑30 (MQ=255) tGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCTTGGa < 1:456295/150‑1 (MQ=255) tcagcggtcagcgAAACACGCTGGCCGCGGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCACCGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCTTGGAGt > 1:544790/1‑150 (MQ=255) tcagcgACACACGCTGGGAGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCTTGGAGTTGGTggg > 2:315959/1‑150 (MQ=255) gcgAAACACGCTGGGcgctgacaaaaagtatttcggcctgacggctaaattcagccatcagggcaacgacgtt < 2:127251‑M2/73‑59 (MQ=255) gcgAAACACGCTGGGcgctgacaaaaagtatttcggcctgacggctaaattcagccatcagggcaacgacgtt > 1:127251‑M2/1‑15 (MQ=255) | GGCCGCTACGGACTGGCCGCTGCGGTTCATGTAGGTGGTGGGGATCAACAAACGAACGTCGTTGCCCTGATGGCTGAATTTAGCCGTCAGGCCGAAATACTTTTTGTCAGCGGTCAGCGAAACACGCTGGGCGCTGGCAAGGCGTTCAACGAAAAGAGCCCCTGCGTTATGCCGGGTCTGTTCGTATTCGGGGCCGGGGTTACCCAGGCCAACGATCAACTGGATGGCGGTCACGTCAGGGGCTCTTCCTTGGAGTTGGTGGG > NC_002947/837734‑837996 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |