New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1515744	18 (0.780)	4 (0.190)	4/230	NT	18.4%	coding (637/1749 nt)	ftsI	peptidoglycan DD transpeptidase
	?	NC_002947	= 1515753	19 (0.890)					coding (646/1749 nt)	ftsI	peptidoglycan DD transpeptidase

ACCTCGACGACCACGGTCGTGAAGGGGTGGAGCTGGCCTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATGGATGTCAAGACCGGTGAGGTCCTGGCCATGGTC  >  NC_002947/1515607‑1515890                                                                                                                                                   |                                                                                                                                          aCCTCGACGACCACGGTCGTGAAGGGGTGGAGCTGGCCTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAcct                                                                                                                                        <  2:77467‑M2/150‑4 (MQ=255)  ccTCGACGACCACGGTCGTGAAGGGGTGGAGCTGGCCTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCCGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAcctt                                                                                                                                       >  1:352510‑M2/1‑146 (MQ=255)   cTCGACGACCACGGTCGTGAAGGGGTGGAGCTGGCCTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAccttg                                                                                                                                      <  1:218396‑M2/150‑6 (MQ=255)    tCGACGACCACGGTCGTGAAGGGGTGGAGCTGGCCTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAccttgg                                                                                                                                     <  1:300119‑M2/150‑7 (MQ=255)      gacgacCACGGTCGTGAAGGGGTGGAGCTGGCCTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCTAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAccttggcg                                                                                                                                   <  1:162467‑M2/150‑9 (MQ=255)        cgacCACGGTCGTGAAGGGGTGGAGCTGGCCTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAccttggcgtt                                                                                                                                 >  2:95815‑M2/1‑140 (MQ=255)                                gCTGGCCTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTa                                                                                                         <  1:77467/150‑1 (MQ=255)                                      cTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAccttg                                                                                                                                      <  2:597349‑M2/115‑6 (MQ=255)                                      cTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAccttg                                                                                                                                      >  1:597349‑M2/1‑110 (MQ=255)                                             gagTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCcgc                                                                                            >  2:513037/1‑150 (MQ=255)                                                  gctggcCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGtt                                                                                       <  1:186386/150‑1 (MQ=255)                                                                   gCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTg                                                                                      >  1:260894/1‑134 (MQ=255)                                                                   gCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTg                                                                                      <  2:260894/134‑1 (MQ=255)                                                                      aGCGACAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAAc                                                                   <  2:300119/150‑1 (MQ=255)                                                                          ccAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAccttggcgttcttggttacctgaatgtccttgatcag                                                                                                      <  1:57162‑M2/111‑38 (MQ=255)                                                                          ccAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGAccttggcgttcttggttacctgaatgtccttgatcag                                                                                                      >  2:57162‑M2/1‑74 (MQ=255)                                                                              gTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCt                                                                                                                     >  1:447836/1‑92 (MQ=255)                                                                              gTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCt                                                                                                                     <  2:447836/92‑1 (MQ=255)                                                                                                    ggCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCa                                     <  2:42780/150‑1 (MQ=255)                                                                                                       tGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATgg                                  <  2:160350/150‑1 (MQ=255)                                                                                                                        gTAACCAAGAACGCAAAGGCCGGGACGACCGTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATGGATGTCAAGACCGGTGAg                 <  2:162467/150‑1 (MQ=255)                                                                                                                         tAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATGGa                                 <  1:229201/133‑1 (MQ=255)                                                                                                                         tAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATGGa                                 >  2:229201/1‑133 (MQ=255)                                                                                                                             cAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATGGATg                               >  2:538593/1‑131 (MQ=255)                                                                                                                             cAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATGGATg                               <  1:538593/131‑1 (MQ=255)                                                                                                                              aaGAACGCCAAGGCCGGGAAGAccttggcgttcttggttacctgaatgtccttgatcagccgaccgcgccggtccttgatcacctggcgcttgccg                                                                 <  2:388571‑M2/96‑75 (MQ=255)                                                                                                                              aaGAACGCCAAGGCCGGGAAGAccttggcgttcttggttacctgaatgtccttgatcagccgaccgcgccggtccttgatcacctggcgcttgccg                                                                 >  1:388571‑M2/1‑22 (MQ=255)                                                                                                                                    gCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGc                                                                        >  2:555498/1‑83 (MQ=255)                                                                                                                                    gCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGc                                                                        <  1:555498/83‑1 (MQ=255)                                                                                                                                      cAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATGGATGTCAAGACCGGTGAGGTCCTGGCGATGGt   >  2:142773/1‑150 (MQ=255)                                                                                                                                       aaGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATGGATGTCAAGACCGGTGAGGTCCTGGCCATGGTc  >  2:435473/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                          ACCTCGACGACCACGGTCGTGAAGGGGTGGAGCTGGCCTATGAAGAGTGGCTGGCCGGCGTGCCCGGCAAGCGCCAGGTGATCAAGGACCGGCGCGGTCGGCTGATCAAGGACATTCAGGTAACCAAGAACGCCAAGGCCGGGAAGACCTTGGCGTTGTCGATAGACCTGCGCCTGCAGTACCTGGCTACCCGCGAGTTGCGCAACGCCATTGCCGAACAGGACGCCAAGGCCGGCAGCCTGGTGATCATGGATGTCAAGACCGGTGAGGTCCTGGCCATGGTC  >  NC_002947/1515607‑1515890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.