| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 22567 | 15 (0.060) | 218 (0.930) | 114/288 | 0.5 | 93.7% | intergenic (+37/‑609) | PP_0017/PP_0018 | transcriptional regulator/hypothetical protein |
| ? | NC_002947 | = 5038521 | NA (NA) | coding (19/255 nt) | PP_4444 | transposase | |||||
Only 100 of 481 total aligned reads displayed.
AGAATCCACACAGCGGAGAGGTTGTTGAGACCAAGGGTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGCTCTCGTCTCAATCTCAGTGA > NC_002947/22418‑22716 | gggctttgaacggtttcggataagagcttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCgt < 2:5263743‑M1/10‑1 (MQ=255) ggctttgaacggtttcggataagagcttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCgtg > 2:24163‑M1/140‑150 (MQ=255) aaTCCACACAGCGGAGAGGTTGTTGAGACCAAGGGTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaa < 2:2852431‑M1/150‑3 (MQ=255) tttgaacggtttcggataagagcttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCgtggtg < 1:1174765‑M1/14‑1 (MQ=255) cacacaGCGGAGAGGTTGTTGAGACCAAGGGTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgt < 2:3814159‑M1/150‑7 (MQ=255) aacggtttcggataagagcttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGcc < 2:4593248‑M1/18‑1 (MQ=255) aacggtttcggataagagcttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGcc < 2:3991128‑M1/18‑1 (MQ=255) aacggtttcggataagagcttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGcc < 2:3933474‑M1/18‑1 (MQ=255) aacgggttcggataagagcttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGcc < 2:935136‑M1/18‑1 (MQ=255) ggtttcggataagagcttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑g < 2:1282827‑M1/21‑1 (MQ=255) cggataagagcttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGc > 1:1623564‑M1/125‑150 (MQ=255) ttcgttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCAtt < 2:4864542‑M1/37‑1 (MQ=255) gaCCAAGGGTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaa < 2:4077577‑M1/150‑29 (MQ=255) ttggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCCAGAATGGGAATTTGCAttcgg > 1:3875195‑M1/110‑148 (MQ=255) cAAGGGTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtc > 1:2313577‑M1/1‑119 (MQ=255) tggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTggg > 1:1878582‑M1/109‑150 (MQ=255) tggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTggg > 2:1842914‑M1/109‑150 (MQ=255) ggcgcatagaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTgggg > 2:2681020‑M1/108‑150 (MQ=255) aGGGTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcag < 2:325915‑M1/150‑34 (MQ=255) gggTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcagg < 2:2300715‑M1/150‑35 (MQ=255) gggTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcagg < 1:754978‑M1/150‑35 (MQ=255) ggtggtAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggc < 2:2139960‑M1/150‑36 (MQ=255) agaaatcctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACg < 1:4572706‑M1/50‑1 (MQ=255) aTCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacc > 2:2046421‑M1/1‑108 (MQ=255) aTCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacc < 1:2110326‑M1/150‑43 (MQ=255) aGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccac < 1:1004432‑M1/150‑46 (MQ=255) ctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAAtttt < 2:3779795‑M1/57‑1 (MQ=255) ctggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAAtttt < 1:3574656‑M1/57‑1 (MQ=255) tggcgataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTc < 2:4362137‑M1/58‑1 (MQ=255) tACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgat < 2:1041683‑M1/150‑50 (MQ=255) cattaagggcgatggtgtccgcgtatttttaagcggacgcgatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGc < 2:719054‑M1/61‑1 (MQ=255) gataagggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCg < 1:329094‑M1/62‑1 (MQ=255) gCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcg > 2:1934113‑M1/1‑98 (MQ=255) ttAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggc > 1:4138974‑M1/1‑96 (MQ=255) tgcgcagtggaaaaaCGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggca > 2:3693720‑M1/8‑95 (MQ=255) gggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGggtgg < 1:3152772‑M1/67‑1 (MQ=255) ggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgggttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGggtggt < 1:3744404‑M1/68‑1 (MQ=255) ggtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGggtggt < 1:3653104‑M1/68‑1 (MQ=255) gtgatcgcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGggtggtg > 1:92696‑M1/82‑150 (MQ=255) gcgtccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGaca < 1:3082692‑M1/75‑1 (MQ=255) aaaaaCGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgccc < 2:693699‑M1/150‑66 (MQ=255) cgtccgcttaaacagacgcggccaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAAGCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGacac > 2:2920238‑M1/75‑150 (MQ=255) aaaCGAGTATGGCGCTGAGGTAGTCGAGACTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccga < 2:2234251‑M1/150‑68 (MQ=255) ccgcttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGAcacaca > 2:4163832‑M1/72‑150 (MQ=255) aCGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgtggcagcagttgcccgatc > 1:1377010‑M1/1‑81 (MQ=255) ttaaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGttt < 2:4779168‑M1/83‑1 (MQ=255) taaaaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTa < 2:2879535‑M1/84‑1 (MQ=255) tATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcact < 2:4279876‑M1/150‑75 (MQ=255) tATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcact < 1:2412476‑M1/150‑75 (MQ=255) aTGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccaatacccactgatgcggcagcagttgcccgatctcactg < 2:4556279‑M1/150‑76 (MQ=255) tGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactgg > 1:5285407‑M1/1‑74 (MQ=255) ggCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggc < 2:2090049‑M1/150‑78 (MQ=255) aaatacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATgc > 1:2723580‑M1/64‑150 (MQ=255) tacgcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCa < 1:513070‑M1/90‑1 (MQ=255) tGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgtggcagcagttgcccgatctcactggcccgct > 1:2546031‑M1/1‑68 (MQ=255) gcggacaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTa < 2:1770407‑M1/93‑1 (MQ=255) acaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATa > 2:511098‑M1/54‑150 (MQ=255) acaccatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATa > 1:2168089‑M1/54‑150 (MQ=255) aGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcg < 2:3364070‑M1/150‑89 (MQ=255) accatcgcccttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATaga < 2:1574952‑M1/99‑1 (MQ=255) tCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggc > 2:1677224‑M1/1‑60 (MQ=255) tCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggc > 1:2833466‑M1/1‑60 (MQ=255) gAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaa > 1:673554‑M1/1‑58 (MQ=255) tCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtca > 1:4470690‑M1/1‑55 (MQ=255) tCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtca < 2:4470690‑M1/87‑33 (MQ=255) cttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACtt < 1:348990‑M1/108‑1 (MQ=255) ttaatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTc < 2:5206816‑M1/109‑1 (MQ=255) ggCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtc < 2:1344696‑M1/150‑100 (MQ=255) gCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtca < 2:3060127‑M1/150‑101 (MQ=255) aatgctggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCaa > 2:3649545‑M1/40‑150 (MQ=255) tggagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAAt < 1:1684973‑M1/116‑1 (MQ=255) cAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacat > 1:4783285‑M1/1‑44 (MQ=255) gagttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATgg > 1:4864542‑M1/33‑150 (MQ=255) agttcggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGa > 1:3916739‑M1/32‑150 (MQ=255) tgattgCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatcttt < 1:1479078‑M1/150‑111 (MQ=255) tgattgCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatcttt < 2:2541297‑M1/150‑111 (MQ=255) tgattgCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatcttt < 2:2480274‑M1/150‑111 (MQ=255) ggaaggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACtctc < 1:591109‑M1/124‑1 (MQ=255) aggtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCaa < 1:2001324‑M1/127‑1 (MQ=255) gtgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCaaaa > 2:2779957‑M1/22‑150 (MQ=255) tgagttcgccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAAt < 2:471953‑M1/130‑1 (MQ=255) gcggcTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatctttgagataggcatacg > 2:796251‑M1/1‑26 (MQ=255) gcggcTTCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatctttgaga > 2:3551658‑M1/1‑26 (MQ=255) ccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCa > 1:4988611‑M1/13‑138 (MQ=255) ccggacgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCa < 2:4988611‑M1/126‑1 (MQ=255) ttCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatctttgagataggcatacggatca > 1:4305437‑M1/1‑21 (MQ=255) ttCTGGCACGAGATGAATCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatctttgagataggcatacggatca > 1:4942401‑M1/1‑21 (MQ=255) acgcttacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGctct > 2:4256676‑M1/9‑150 (MQ=255) cgcttacGATGAATCGTGGTGCGCCCC‑GAATGCATATTCCCTTTCTGGGGCGTGACGAATTTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGGGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGCtctc > 2:601436‑M1/8‑150 (MQ=255) tacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGCTCTCGtct < 2:3467540‑M1/147‑1 (MQ=255) tacGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGCTCTCGtct > 1:3951833‑M1/4‑150 (MQ=255) acGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGa > 1:3335548‑M1/3‑50 (MQ=255) gaTGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGCTCTCGTCTCaa > 1:1309597/1‑150 (MQ=255) gaTGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGCTCTCGTCTCaa > 1:4699935/1‑150 (MQ=255) gaTGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGCTCTCGTCTCaa > 1:1939468/1‑150 (MQ=255) tCGTaagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatctttgagataggcatacggatcatgcccgttcatgcgcgc > 2:1444526‑M1/1‑4 (MQ=255) cGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGCTCTCGTCTCAATCTCAGt < 2:1178851/150‑1 (MQ=255) taagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatctttgagataggcatacggatcatgcccgttcatgcgcgccga > 1:732220‑M1/1‑1 (MQ=255) taagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatctttgagataggcatacggatcatgcccgttcatgcgcgccga > 1:295547‑M1/1‑1 (MQ=255) taagcgtccgcccaacgcaccttgcgtaagtcaggccgatacccactgatgcggcagcagttgcccgatctcactggcccgctgtgtcggcaaccgcgtcagcacatctttgagataggcatacggatcatgcccgttcatgcgcgccga > 2:3135848‑M1/1‑1 (MQ=255) | AGAATCCACACAGCGGAGAGGTTGTTGAGACCAAGGGTGGTAATCAGCGTACGCTTAAGGCCTGGAAAAACGAGTATGGCGCTGAGGTAGTCGAGTCTTGGCTCGCCAATTGATTGCACTGCAGGCGGCTTCTGGCACGAGATGAATCGTGGTGCGCCCC‑GAATGCAAATTCCCATTCTGGGGCGTGACGAAATTTTCTGCGGGTGGTGGTGACACACAGTTTATGCGCATTAAATAGAGGTCCACTTCAAAAAATGGACTCTCCAAAATGCGGAATGCTCTCGTCTCAATCTCAGTGA > NC_002947/22418‑22716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |