New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 1224935 (1.500)8 (0.360) 6/240 NT 18.4% coding (28/1104 nt) recF DNA replication/repair protein
?NC_002947 = 12267 38 (1.730)coding (46/1104 nt) recF DNA replication/repair protein

GATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/12095‑12249
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcaccg‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCACTG  <  NC_002947/12267‑12140
                                                                                                                                                                                                                                                                                              
GATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTCTAGCAGGCGAAATGTCCCTTCGACGTATCATGGT                                                                                                                                          >  1:545563/1‑150
                           CTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGT                                                                                                            >  2:363274/1‑150
                             TGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGA                                                                                                          <  1:264238/150‑1
                             TGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGA                                                                                                          <  1:363274/150‑1
                                                        TGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGA                                                                                                          <  1:153981/123‑1
                                                        TGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGA                                                                                                          >  2:153981/1‑123
                                                                                        GTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCAT                                                                                                      <  1:525424/95‑1
                                                                                        GTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCAT                                                                                                      >  2:525424/1‑95
                                                                                                                                  TCCCTTCGACGTATCATGGTCACCGCGGTGCGCAACTT‑‑GCACC‑CGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCA     >  2:574314/1‑150
                                                                                                                                                    GTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATC                                 >  1:497853/1‑104
                                                                                                                                                    GTCACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATC                                 <  2:497853/104‑1
                                                                                                                                                       ACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCACTG  <  1:33684/132‑1
                                                                                                                                                       ACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCACTG  >  2:33684/1‑132
                                                                                                                                                       ACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATC                                 <  1:519635/101‑1
                                                                                                                                                       ACCG‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATC                                 >  2:519635/1‑101
                                                                                                                                                                                                                                                                                              
GATGACTACTGAGCAAGTTCGTCTGATCTTGTCCGATTCAAACAGCAGTGCGCTGCTGCAGGAAGCTGGCAATGACGATTCTTCCTACGTTGTCATGCCGATGCGCCTGTAACCTGTAGCAGGCGAAATGTCCCTTCGACGTATCATGGTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/12095‑12249
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcaccg‑GGT‑‑GCAAGTTGCGCACCGCGGTGACCATGATACGTCGAAGGGACATTTCGCCTGCTACAGGTTACAGGCGCATCGGCATGACAACGTAGGAAGAATCGTCATTGCCAGCTTCCTGCAGCAGCGCACTG  <  NC_002947/12267‑12140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.