| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 745350 = | NA (NA) | 3 (0.140) | 3/236 | NT | NA | coding (1152/1533 nt) | PP_0637 | transposase |
| ? | NC_002947 | 745416 = | NA (NA) | coding (1086/1533 nt) | PP_0637 | transposase | |||||
TCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGAGCGGTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/745507‑745350‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccttgagGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAG > NC_002947/745416‑745562 TCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGAGCGGTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGA > 1:78956/1‑150TCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGAGCGGTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGA < 2:129294/150‑1 AAGCGCAGAAGGTGCAGCCTAAGGGCAAGAGCGGTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCC < 2:339987/150‑1 GCAGAAGGTGCAGCCTAAGGGCAAGAGCGGTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGA > 1:311981/1‑150 ACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGCTCTTGCCCTTAGGCTGCA > 2:426172/1‑150 TCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTT < 1:24597/92‑1 TCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTT > 2:24597/1‑92 ATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGCTCTTGCCCTTAGGCTG < 1:193392/84‑1 ATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGCTCTTGCCCTTAGGCTG > 2:193392/1‑84 CTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTG > 2:27033/1‑150 GAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGGCAGCGCAACATCGGCGCGACCGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAG > 2:54306/1‑150 TCGAAGCGCAGAAGGTGCAGCCTAAGGGCAAGAGCGGTCGCGCCGATGTTGCGCTGACGATGATCAACAAACTGTATGGCATCGAACGCGACCTCAAGGATGCCAGCGATGAACAGCGATTCATCGGTCGTCAGGAACGAAGCCTGCCGATCCTTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/745507‑745350‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccttgagGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGCTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAATTTACGCCGGACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAG > NC_002947/745416‑745562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |