New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2301803 =	33 (1.420)	3 (0.140)	4/238	NT	9.9%	coding (74/654 nt)	PP_5497	rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2301828 =	24 (1.100)					coding (99/654 nt)	PP_5497	rhs repeat‑associated core domain‑containing protein

AACAAAAGGCGTAGCTGTTCACCCCACCCTCACCAAACGGGCTGAAGCTGTCCGCCGACAGAAAGCGCATCAGAGCCGGGCTGAATGCACGATACCCGTTGCCCAATAGGTAACTCGTCAACTCAACGGCCAGCCGTTCGCCGTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2301949‑2301803 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgttgaGTTGACGAGTTACCTATTGGGCAACGGGTATCGTGCATTCAGCCCGGCTCTGATGCGCTTTCTGTCGGCGGACAGCTTCAGCCCGTTTGGTGAGGGTGGGGTGAACAGCTACGCCTTTTGTTCGAATGATCCTGTTAATCGGCAGGAT  >  NC_002947/2301828‑2301975                                                                                                                                                                                                                                                                                                         AACAAAAGGCGTAGCTGTTCACCCCACCCTCACCAAACGGGCTGAAGCTGTCCGCCGACAGAAAGCGCATCAGAGCCGGGCTGAATGCACGATACCCGTTGCCCAATAGGTAACTCGTCAACTCAACGGCGAACGGCTGGCCGTTGAGTT                                                                                                                                                   <  2:42513/150‑1           GTAGCTGTACGCCCCACCCTCACCAAACGGGCTGAAGCTGTCCGCCGATAGAAAGCGCATCAGAGCCGGGCTGAATGCACGATACCCGTTGCCCAATAGGTAACTCGTCAACTCAACGGCGAACGGCTGGCCGTTGAGTTGACGAGTTAC                                                                                                                                         <  1:333177/150‑1                                                                                                                         ACTCAACGGCCAGCCGTTCGCCGTTGAGTTGACGAGTTACCTATTGGGCAACGGGTATCGTGCATTCAGCCCGGCTCTGATGCGCTTTCTGTC                                                                                    >  1:238813/1‑93                                                                                                                         ACTCAACGGCCAGCCGTTCGCCGTTGAGTTGACGAGTTACCTATTGGGCAACGGGTATCGTGCATTCAGCCCGGCTCTGATGCGCTTTCTGTC                                                                                    <  2:238813/93‑1                                                                                                                                                  GAGTTGACGAGTTACCTATTGGGCAACGGGTATCGTGCATTCAGCCCGGCTCTGATGCGCTTTCTGTCGGCGGACAGCTTCAGCCCGTTTGGTGAGGGTGGGGTGAACAGCTACGCCTTTTGTTCGAATGATCCTGTTAATCGGCAGGAT  <  2:471807/150‑1                                                                                                                                                                                                                                                                                                         AACAAAAGGCGTAGCTGTTCACCCCACCCTCACCAAACGGGCTGAAGCTGTCCGCCGACAGAAAGCGCATCAGAGCCGGGCTGAATGCACGATACCCGTTGCCCAATAGGTAACTCGTCAACTCAACGGCCAGCCGTTCGCCGTTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2301949‑2301803 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgttgaGTTGACGAGTTACCTATTGGGCAACGGGTATCGTGCATTCAGCCCGGCTCTGATGCGCTTTCTGTCGGCGGACAGCTTCAGCCCGTTTGGTGAGGGTGGGGTGAACAGCTACGCCTTTTGTTCGAATGATCCTGTTAATCGGCAGGAT  >  NC_002947/2301828‑2301975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.