| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 734332 | 23 (0.990) | 4 (0.190) | 4/232 | NT | 15.7% | coding (988/1296 nt) | ndh | NADH dehydrogenase |
| ? | NC_002947 | = 734372 | 22 (1.030) | coding (948/1296 nt) | ndh | NADH dehydrogenase | |||||
ACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAGGGCGCACGACCAGCTGGTTGATGCGGTTGGTTTCCAGGCCATCGAT > NC_002947/734189‑734476 | aCCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCCGCCTCGAAGCCTCCTGGTGCGCCGCCtgtggggg > 2:259093/1‑146 (MQ=255) gTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCAc > 1:447504/1‑150 (MQ=255) gTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGAACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGcccgcaacccggcag > 1:199814‑M1/1‑135 (MQ=255) cACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCCGCGCCTTGTTCTCCAGGCGGGCCTTCAGGCTTTGCGCCGGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCCCGTTACg > 2:186195/1‑150 (MQ=255) cgccgAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATc > 1:366270/1‑150 (MQ=255) cagcgacaCCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGCCACGTTACGATCGCTGCCGGGTTGCgg < 1:113993/150‑1 (MQ=255) gacaCCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCgg > 2:252451/1‑146 (MQ=255) gacaCCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCgg < 1:252451/146‑1 (MQ=255) acCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGcccgcaacccggcagcgatcgtaacgtgccgccgcgcgcacaggcg < 2:309695‑M1/150‑47 (MQ=255) acCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGcccgcaacccggcagcgatcgtaacgtgccgccgcgcgcacaggcg > 1:309695‑M1/1‑104 (MQ=255) aGCGAGCCATAGTCCTTGTACTCGAACGTCGGCAGGGTCTTGTTCTCGAGGCGCGCCTTTAGGCTGTGCGCCAAAATAGACCGGAACCGGCCCTGCGTCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGgcggcg > 1:444321/1‑150 (MQ=255) gCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCggg > 2:51510/1‑140 (MQ=255) gCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCggg < 1:51510/140‑1 (MQ=255) gCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGcaggcggcgc > 1:109960‑M2/1‑140 (MQ=255) cGAGCCATAGGCCCGGTACTCGGACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCGGGTGCGCCGCCGGTGCGCGCGGCGGCACGTGACGATCGCTGCCGGGTTGCGGGcaggcggcgca > 1:186195‑M2/1‑139 (MQ=255) aGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGcccgcaacccggcagcgatcgtaacgtgccgccgcgcgcacaggcggcgcaccagcagg < 2:199814‑M1/150‑60 (MQ=255) gTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGaa < 1:451769/150‑1 (MQ=255) gCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTcgc > 1:89046/1‑150 (MQ=255) cAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTcgcg > 1:298499/1‑150 (MQ=255) aGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCgg < 2:366270/150‑1 (MQ=255) cTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCAcc < 1:410977/120‑1 (MQ=255) cTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCAcc > 2:410977/1‑120 (MQ=255) tGTTCTCCGGGCGCGCCGGCAGGCTTTGCGCCAGCATCGAAGGCGGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGttt < 2:76058/150‑1 (MQ=255) ctcCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAg < 1:596938/150‑1 (MQ=255) tcCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAgg > 1:241467/1‑150 (MQ=255) gcgcgcCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAgg < 2:297880/150‑1 (MQ=255) cgcgcCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAggg < 2:89046/150‑1 (MQ=255) cTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGCAGGGCGCCCGGCTAGc > 2:493854/1‑150 (MQ=255) gcgcCAGCATCGAAGGCTGCTGGTGCGCCGGCTGTGTGCGCGGCGGCACGTTATCATCGCTGCCGGGTTGCGGGTAGGAGGTGGAGTCACCGAAGTCGAAGATGAGCTAGTTGCAGGTGGTAGCAAGGGTAGCCCGCTCGACCAGCCGGt < 2:207294/150‑1 (MQ=255) ccTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGcaggcggcgcaccagcaggcttcgatgctggcgcaaagcctgaaggcgcgcctggagaacaaggccctgccgacgtacgagtacaaggact < 2:199814‑M2/150‑92 (MQ=255) tGCGCCGCCTGcccgcaacccggcagcgatcgtcacgtgccgccgcgcgcaccggcggcgcacccgcaggcttcgatgctggcgcaaagcctgaaggcgcgcctggagaacaaggccctgccgacgtccgagtaccgggcctatggctcg > 1:186195‑M1/1‑11 (MQ=255) gcgcCGCCTGcccgcaacccggcagcgatcgtaacgtgccgccgcgcgcacaggcggcgcaccagcaggcttcgatgctggcgcaaagcctgaaggcgcgcctggagaacaaggccctgccgacgtacgagtacaaggactatggctcgc > 1:109960‑M1/1‑10 (MQ=255) ccgccTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAGCGGGCACGAGCACCTTGGTGATGTTGGTGTTTTCCAGGCCATCGa > 2:5733/1‑150 (MQ=255) cgccTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGcaggcggcgcaccagcaggcttcgatgctggcgcaaagcctgaaggcgcgcctggagaacaaggccctgccgacgtacgagtacaaggactatggctcgctggt < 2:309695‑M2/150‑105 (MQ=255) cgccTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGcaggcggcgcaccagcaggcttcgatgctggcgcaaagcctgaaggcgcgcctggagaacaaggccctgccgacgtacgagtacaaggactatggctcgctggt > 1:309695‑M2/1‑46 (MQ=255) | ACCCATCAGGTTGCCCACCGCCGAGAAGCGCGACAGCGACACCAGCGAGCCATAGTCCTTGTACTCGTACGTCGGCAGGGCCTTGTTCTCCAGGCGCGCCTTCAGGCTTTGCGCCAGCATCGAAGCCTGCTGGTGCGCCGCCTGTGCGCGCGGCGGCACGTTACGATCGCTGCCGGGTTGCGGGCAGGCGGCGCAGTCACCGAAGGCGAAGATGTTGTCGTCGCGGGTGGTTTGCAGGGTAGGGCGCACGACCAGCTGGTTGATGCGGTTGGTTTCCAGGCCATCGAT > NC_002947/734189‑734476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |