New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4893598 = | 27 (1.160) | 3 (0.160) | 3/200 | NT | 12.2% | intergenic (+28/‑180) | pyk/PP_4302 | pyruvate kinase/urea transporter |
? | NC_002947 | 4893677 = | 22 (1.200) | intergenic (+107/‑101) | pyk/PP_4302 | pyruvate kinase/urea transporter |
TGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCAC > NC_002947/4893452‑4893746 | cgtggcccagtcggggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTcgc > 2:213921‑M1/147‑150 (MQ=255) cagtcggggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagaggtatacagggagggctttgccctccaaTCGCGACACaa > 1:298616‑M1/140‑150 (MQ=255) cagtcggggcacgggttgacgaaaattttggtatacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtcgagcggtattcagggagggctttaccctccaaTCGCGACACaa < 2:106062‑M1/11‑1 (MQ=255) gtcggggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAgg > 2:251638‑M1/138‑150 (MQ=255) gtcggggcacgggttgacgaaatttttggtgtacatggggcagtcagtggaggttgatgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAgg > 1:552771‑M1/138‑150 (MQ=255) gcAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCC > 1:604589‑M1/1‑150 (MQ=255) atcgcatGGCCAGCCGTGGCGATACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCAGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCA < 2:273332‑M1/147‑1 (MQ=255) aTGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGG < 2:536003‑M1/150‑1 (MQ=255) ggCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGcc < 1:78101/150‑1 (MQ=255) ccGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTg > 1:55247/1‑150 (MQ=255) cGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACaa < 1:445207/150‑1 (MQ=255) cacGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGTCAGGGCCTGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCAGCTCCCACAGGGCCACGCTGGCACAAggg > 1:38534/1‑150 (MQ=255) gctgATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCa > 2:328925/1‑150 (MQ=255) tgATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGt < 2:604589/150‑1 (MQ=255) tgATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGt > 2:289366/1‑150 (MQ=255) gATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGGACAAGGGAATGCAGTc < 1:434174‑M2/150‑2 (MQ=255) ccGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggccctgt < 2:572698‑M1/150‑32 (MQ=255) cGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtg > 1:571132‑M2/1‑143 (MQ=255) gCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGC > 1:158116‑M1/1‑96 (MQ=255) gCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGC < 2:158116‑M1/96‑1 (MQ=255) tgggggagcggtgggcctctttgggcctcggttttccgcggtcgggtagagcggtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCtt > 1:254152‑M1/81‑150 (MQ=255) cTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggccctgtgggagc < 1:188776‑M1/144‑38 (MQ=255) cTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGactgcattcccttgtgccagcgtggccctgtgggagc > 2:188776‑M1/1‑107 (MQ=255) cTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggcctt > 1:328925‑M2/1‑132 (MQ=255) cTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggcctt < 2:409610‑M2/150‑19 (MQ=255) ggCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcggccttgtgtc > 2:302222‑M2/1‑127 (MQ=255) gCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGAt < 2:256036/150‑1 (MQ=255) ccGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGAtt < 1:289366/150‑1 (MQ=255) gggTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGAGTTGCGCCCCTTTCGCGACACAAGCCCGCTCCCACATGGCCACTCTCGCACAAGGGAATGCAATCCCTGTGTGAGCGGCCTTGTGTCGCGATTga > 2:29128/1‑149 (MQ=255) ggTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCCGCCTTGTGTCGCGATTGGa < 2:55247/150‑1 (MQ=255) tAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAg > 1:431017/1‑150 (MQ=255) acacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGcc > 2:485488/1‑150 (MQ=255) cacGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGccc < 1:485488/150‑1 (MQ=255) cTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGccctccc < 2:434174/150‑1 (MQ=255) gagaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcg > 1:349810‑M2/1‑94 (MQ=255) gagaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTccctgtgggagcg < 2:349810‑M2/107‑14 (MQ=255) gagaCTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCg > 1:506322/1‑150 (MQ=255) tttGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTa > 2:596860/1‑150 (MQ=255) tCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAccc < 1:362479/148‑1 (MQ=255) tCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAccc > 2:362479/1‑148 (MQ=255) gtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTg < 1:3044‑M1/82‑1 (MQ=255) gtattcagggagggctttgccctccaaTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTg > 2:3044‑M1/28‑109 (MQ=255) gggCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGa > 2:27312/1‑150 (MQ=255) gggCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGa < 1:65046/150‑1 (MQ=255) ggcgcCCCTTTGGCGACACAAGGCTGCTCACACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGTCTGGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGTAAACCGAGGCCCaaa < 2:38534/149‑1 (MQ=255) gcgcCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACACTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAag > 1:582691/1‑150 (MQ=255) cgcCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAaga > 1:597511/1‑150 (MQ=255) gcCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTAGGTGACCGCGGAAAACCGAGGCCCAAagag > 1:308368/1‑150 (MQ=255) ccccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAagaag > 1:152111/1‑148 (MQ=255) ccccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAgg < 2:431017/150‑1 (MQ=255) cccTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTATACCCGACCGCGGAAAACCTAGGCCCAACGAGGc > 1:281002/1‑150 (MQ=255) cTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGAAGCGGCCTTGTGTCGCTATTGGAGCGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGAAAAACCGAGGCCCAAAGAGGccc > 1:106062/1‑150 (MQ=255) ttCGCTACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCAc < 2:199652/150‑1 (MQ=255) | TGGAGATTGCCCAGGCGCAAGGCATGGCCAGCCGTGGCGACACGCTGCTGATCACCGCTGGCGTGCCTTTCGGCAAGCCGGGTACGACTAACACGCTGCGGATCGAGACTTTGATCTGAGATTGCCGGGGGCGCGTTGCGCCCCTTTCGCGACACAAGGCCGCTCCCACAGGGCCACGCTGGCACAAGGGAATGCAGTCCCTGTGGGAGCGGCCTTGTGTCGCGATTGGAGGGCAAAGCCCTCCCTGAATACCGCTCTACCCGACCGCGGAAAACCGAGGCCCAAAGAGGCCCAC > NC_002947/4893452‑4893746 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |