| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,188,018 | Δ1 bp | 5.1% | intergenic (+79/‑131) | PP_3683 → / → PP_3684 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,188,018 | 0 | T | . | 5.1% | 370.7 / 12.6 | 117 | intergenic (+79/‑131) | PP_3683/PP_3684 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (57/52); new base . (3/3); total (61/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.29e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
TCTAGCGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTCGCGT > NC_002947/4187870‑4188166 | tCTAGCGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTa > 1:697361/1‑150 (MQ=255) cTAGCGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTaa < 2:110557/150‑1 (MQ=255) aGCGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGc < 2:618486/150‑1 (MQ=255) cGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCgg > 2:1863666/1‑150 (MQ=255) gttggttgATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGc > 2:2048588/1‑150 (MQ=255) ttggttgATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCGCAGCAATCGGAATTAGCCCACGGCTGGCCTCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCGT‑GCTAAGCGGCt > 1:876429/1‑150 (MQ=255) ttgATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGc > 1:2060847/1‑150 (MQ=255) tgATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGcc < 2:349785/150‑1 (MQ=255) tgATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGcc < 2:349674/150‑1 (MQ=255) tGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTa > 2:329682/1‑150 (MQ=255) ccTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTTAGC‑AAGCGGCTTgg < 1:1353017/143‑1 (MQ=255) ccTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTTAGC‑AAGCGGCTTgg > 2:1353017/1‑143 (MQ=255) tCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACgg > 2:1098274/1‑150 (MQ=255) tCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGCGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACgg > 2:2277183/1‑150 (MQ=255) tCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCt < 1:2048588/150‑1 (MQ=255) cGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCtt < 1:1098274/150‑1 (MQ=255) cGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCtt < 1:329682/150‑1 (MQ=255) gCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTc < 1:1590397/150‑1 (MQ=255) gCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCACAGCTCTCGGCGGTACCTCAAGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGTGCTTTCATCCTc > 2:1327118/1‑150 (MQ=255) cGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTcgc > 1:1068217/1‑150 (MQ=255) gATCATGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTc > 2:530662/1‑147 (MQ=255) gATCATGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTc < 1:530662/147‑1 (MQ=255) gATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATc > 1:2023301/1‑144 (MQ=255) gATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATc > 1:2023163/1‑144 (MQ=255) gATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATc < 2:2023163/144‑1 (MQ=255) aCGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTc > 2:1156375/1‑150 (MQ=255) gATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGcc > 2:775025/1‑122 (MQ=255) gATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGcc < 1:775025/122‑1 (MQ=255) gATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCg > 2:714057/1‑150 (MQ=255) aTGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCgg < 1:861303/150‑1 (MQ=255) tGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGc < 1:428269/150‑1 (MQ=255) gCCAAGGATGAAGACAAGCCGTCCTAGCAGTCTCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGcc > 2:1973573/1‑150 (MQ=255) ccAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCa > 1:2449378/1‑150 (MQ=255) cAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCaa > 1:819114/1‑150 (MQ=255) cAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCaa > 2:230645/1‑150 (MQ=255) cAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCaa > 2:1441320/1‑150 (MQ=255) aaGACAAGCCGTCCTAGCAGTCGCTCTCTCAGCTCTCGCCGTGAACACATGGCGCGCCCCTCGCGGTGCCGTCTGGCGTCCACCAAACCGCTT‑GCTAAGCGGCTTCGCCCTAACGGGCCTTCATCCTCGCGCCTCCGGCCAAGGCCcgcg > 2:75175/1‑150 (MQ=255) aCAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGGTCCCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCCCCGGCCAAGGCCTgcgcgc > 2:202724/1‑150 (MQ=255) gCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACgg > 2:1927567/1‑109 (MQ=255) gCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACgg < 1:1927567/109‑1 (MQ=255) gTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCtt > 2:1065182/1‑150 (MQ=255) ccTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGc < 1:600749/150‑1 (MQ=255) tAGCAGTCGCTTACTCAGCTTCCGGCGTTAACCCATCGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCGAACGCCTGCGCGCTCCGCTTGCCa > 2:1207345/1‑150 (MQ=255) gCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCaaa < 1:1156375/150‑1 (MQ=255) gCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCaaa > 1:1847779/1‑150 (MQ=255) gCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCaaa > 2:757251/1‑150 (MQ=255) cAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAAt < 2:1795436/150‑1 (MQ=255) aGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATc < 1:1441320/150‑1 (MQ=255) tCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGTTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATaaa > 2:2446228/1‑150 (MQ=255) gCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCACGCTCGGCGCGCTCCGCTTGCCAAATCaaaa < 1:2277183/150‑1 (MQ=255) cTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAg < 2:876429/150‑1 (MQ=255) cTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAg < 1:1172719/150‑1 (MQ=255) cctcAGCTCTCGGTGTTACCCCATGGCACCCCGCTGGCGGTGCCGGCTGGCGTGAACCACGCCGCAT‑GCCGTTGGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTc < 1:1002529/149‑1 (MQ=255) tcAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCAt > 1:1648729/1‑150 (MQ=255) aGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCAtct > 1:272736/1‑150 (MQ=255) tctcGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCAAAAACGGGCTTTCATACTAAGACCTCGCTCCAAATGCTGCTCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTa < 1:1863666/150‑1 (MQ=255) tcGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGa > 1:618649/1‑150 (MQ=255) tcGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGa > 1:294665/1‑150 (MQ=255) gCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTc < 1:1450176/117‑1 (MQ=255) gCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTc > 2:1450176/1‑117 (MQ=255) cGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCgg > 2:804923/1‑63 (MQ=255) cGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCgg < 1:804923/63‑1 (MQ=255) gTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCaaaa < 1:1644977/132‑1 (MQ=255) gTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCaaaa > 2:1644977/1‑132 (MQ=255) tACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTcc < 2:1648729/150‑1 (MQ=255) tACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTAGCTTCGCGTGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGGTcc < 2:1520798/150‑1 (MQ=255) ccTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTc < 2:2194665/132‑1 (MQ=255) cTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGa < 2:1856837/140‑1 (MQ=255) cTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGa > 1:1856837/1‑140 (MQ=255) cTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAg > 1:2263749/1‑150 (MQ=255) cTCATGGCGCGCCCCTAGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTccccg > 1:791533/1‑148 (MQ=255) gcgcCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGGGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGc > 1:1790053/1‑121 (MQ=255) cgcCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCg > 1:76537/1‑103 (MQ=255) gcCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACgtgt < 2:819114/150‑1 (MQ=255) cccTGGCGGGGCCGGCTGGCGTGAACCAATCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCg > 1:666931/1‑150 (MQ=255) cccTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCg < 2:618649/150‑1 (MQ=255) cccTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCCTTCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCg > 1:743937/1‑150 (MQ=255) ccTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAg < 2:2116570/126‑1 (MQ=255) ccTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAg > 1:2116570/1‑126 (MQ=255) cTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCt < 1:1067506/95‑1 (MQ=255) cTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCt > 2:1067506/1‑95 (MQ=255) cTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCt < 1:230645/150‑1 (MQ=255) gCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTcc < 2:2406073/125‑1 (MQ=255) gCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTcc > 1:2406073/1‑125 (MQ=255) ggCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAg < 2:463046/150‑1 (MQ=255) tGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCtt < 2:2263749/150‑1 (MQ=255) ccAAGCCGCTTAGC‑AAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAg < 1:2208695/113‑1 (MQ=255) ccAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAg < 1:272199/61‑1 (MQ=255) ccAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAg > 2:272199/1‑61 (MQ=255) ccAAGCCGCTT‑AGCAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAg > 2:2208695/1‑113 (MQ=255) cAAGCCGCTTAGC‑AAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTTCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCt > 1:2316755/1‑150 (MQ=255) cAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCt > 1:1766261/1‑150 (MQ=255) cAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCt > 2:805971/1‑150 (MQ=255) aaGCCGCTTAGC‑AAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCCAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTg > 1:2139073/1‑150 (MQ=255) ccGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGttt < 2:2060847/150‑1 (MQ=255) cTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTcc > 2:570468/1‑102 (MQ=255) cTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTcc < 1:570468/102‑1 (MQ=255) cTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTc < 2:697361/150‑1 (MQ=255) cTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTc < 2:1675022/150‑1 (MQ=255) cTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCGAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTCGCGt < 1:757251/150‑1 (MQ=255) | TCTAGCGTTGGTTGATGCCTCATCGGTAGCTGCCGATCACGATGCCAAGGATGAAGACAAGCCGTCCTAGCAGTCGCTTTCTCAGCTCTCGGCGTTACCTCATGGCGCGCCCCTGGCGGGGCCGGCTGGCGTGAACCAAGCCGCTT‑GCTAAGCGGCTTGGCCCTAACGGGCTTTCATCCTCGCGCCTCCGGCCAAGGCCTGCGCGCTCCGCTTGCCAAATCAAAAGCTCATCTCTAGATAGCTCCCAGTACAACGTGTCGCTTCGCCTCCGATCAAGCCTTGCGCTGTTTTTCGCGT > NC_002947/4187870‑4188166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |