| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,314,775 | Δ1 bp | 13.4% | coding (933/1209 nt) | aspC → | aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,314,775 | 0 | A | . | 13.4% | 323.8 / 46.3 | 112 | coding (933/1209 nt) | aspC | aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (47/49); new base . (9/6); total (56/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.96e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
CTTGGCAAGCTCAGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGATTCCCTATCA > NC_002947/4314626‑4314924 | ggCAAGCTCAGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACAt < 1:1297014/150‑1 (MQ=255) cAAGCTCAGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATg‑g < 1:1342653/150‑1 (MQ=255) aGCTCAGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGCCACATG‑Gcc > 2:2400529/1‑150 (MQ=255) tCAGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTgg > 2:2065632/1‑150 (MQ=255) acatccagctgcATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTgg > 2:1973779/8‑150 (MQ=255) cAGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGa < 1:447085/150‑1 (MQ=255) cAGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGC‑CATGTGCCTGGa > 1:80766/1‑150 (MQ=255) cAGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGC‑CATGTGCCTGGa < 1:678888/150‑1 (MQ=255) aGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAg < 2:59675/150‑1 (MQ=255) ccTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTGATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGgt < 1:2032314/150‑1 (MQ=255) ccTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGgt > 1:343438/1‑150 (MQ=255) tgctgcATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGgtgt > 1:17627/1‑150 (MQ=255) gcATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACTGT‑TCCTGTAGGTGTT‑aaa < 2:26096/150‑1 (MQ=255) cATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAAc < 2:470816/150‑1 (MQ=255) cATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGC‑CATGTGCCTGGAgaata < 2:267312/145‑5 (MQ=255) cATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGC‑CATGTGCCTGGAgaata > 1:267312/1‑141 (MQ=255) aTGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACg > 1:1743219/1‑150 (MQ=255) tGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGC‑CATGTGCCTGGAgaatat < 1:540084/144‑6 (MQ=255) tGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGC‑CATGTGCCTGGAgaatat > 2:540084/1‑139 (MQ=255) gAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCt > 2:2114380/1‑150 (MQ=255) ggCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGca < 1:2114380/150‑1 (MQ=255) ccGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTc > 2:1433225/1‑150 (MQ=255) gcgTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCtt < 2:1159348/150‑1 (MQ=255) cgTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCttt < 1:2065632/150‑1 (MQ=255) cgTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCttt < 2:234524/150‑1 (MQ=255) cgTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCttt < 2:1743219/150‑1 (MQ=255) gTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTg < 2:1127302/150‑1 (MQ=255) tATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGt < 1:375408/150‑1 (MQ=255) ttttACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGttt > 1:845009/1‑150 (MQ=255) ttttACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGttt < 1:2386531/150‑1 (MQ=255) tttACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTa > 2:2083527/1‑150 (MQ=255) tCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCATCGACGTGCGGTAATGGTCGATATTCTCCAGGC‑CATGTGCCTGGAga < 1:1864455/114‑2 (MQ=255) tCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGttt < 1:1429665/144‑1 (MQ=255) tCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGttt > 2:1429665/1‑144 (MQ=255) tCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGc < 2:845009/150‑1 (MQ=255) tCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGC‑CATGTGCCTGGAga > 2:1864455/1‑113 (MQ=255) gACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGc < 1:1898305/150‑1 (MQ=255) cTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGc > 1:809516/1‑150 (MQ=255) cTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGc > 1:1335176/1‑150 (MQ=255) tGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGc < 1:2298030/110‑1 (MQ=255) tGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGc > 2:2298030/1‑110 (MQ=255) tGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCt < 2:2363333/150‑1 (MQ=255) tGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCt > 2:2378700/1‑150 (MQ=255) cATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCtgt > 1:501847/1‑150 (MQ=255) tctcGACGACCGGGGCTTCGGCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCt < 1:1970090/119‑1 (MQ=255) tctcGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCt > 2:1970090/1‑119 (MQ=255) gacgacCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCtt > 2:1265622/1‑116 (MQ=255) gacgacCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCtt < 1:1265622/116‑1 (MQ=255) acCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAATGGCa > 2:1877575/1‑150 (MQ=255) cGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAgg > 1:129033/1‑85 (MQ=255) cGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAgg < 2:129033/85‑1 (MQ=255) gggCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGAc < 2:2430285/150‑1 (MQ=255) ggCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAg < 1:850458/81‑1 (MQ=255) ggCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAg > 2:850458/1‑81 (MQ=255) cTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTTCGATGTCCTGCGGCTGTACATAACGGCAGGACAtt < 1:1901365/150‑1 (MQ=255) cTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACAtt > 2:1732526/1‑150 (MQ=255) ttCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGa < 1:1646910/133‑1 (MQ=255) ttCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGa > 2:1646910/1‑133 (MQ=255) ttCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTc > 1:1667961/1‑150 (MQ=255) gacGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGcc > 2:2110839/3‑150 (MQ=255) ccGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCa < 1:2110839/150‑1 (MQ=255) gCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCa < 1:1732526/150‑1 (MQ=255) cTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAgg > 1:273516/1‑150 (MQ=255) cTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTAGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAgg < 2:1180869/150‑1 (MQ=255) tttGCCAGTGCATAGCTCAGCGACGTGCGGTAAAGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACACTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAggg > 2:296949/1‑150 (MQ=255) ttGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGa < 2:1359044/150‑1 (MQ=255) taGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACttt > 2:1641114/2‑150 (MQ=255) cAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTc < 1:612378/132‑1 (MQ=255) cAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTc > 2:612378/1‑132 (MQ=255) cAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACttt > 2:226467/1‑150 (MQ=255) gTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTg < 2:2324524/86‑1 (MQ=255) gTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTg > 1:2324524/1‑86 (MQ=255) tGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCg > 1:2295632/1‑150 (MQ=255) gCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATAc < 2:809516/150‑1 (MQ=255) aGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTgg < 2:2429146/150‑1 (MQ=255) cGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGc < 2:1478783/85‑1 (MQ=255) cGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGc > 1:1478783/1‑85 (MQ=255) cGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGc < 1:1466014/150‑1 (MQ=255) gTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGGGTGGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTg < 1:757136/150‑1 (MQ=255) tAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTgg < 1:1674223/150‑1 (MQ=255) tGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTa > 2:2220477/1‑150 (MQ=255) gTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATc > 1:1365504/1‑150 (MQ=255) gTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATc > 1:2091659/1‑150 (MQ=255) tCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATcc < 2:17627/150‑1 (MQ=255) gATATTCTCCAGGCACATG‑GCCTGGAGGTGTTAAAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCt > 1:1726446/1‑150 (MQ=255) gATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTATCTACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTg > 1:145372/1‑150 (MQ=255) atatTCTCCAGGCCCATG‑GCATGGGGATCTC‑GAAGTCGGACTGCACATTCTTTGTTTCCGCGCGGTGTATTCCGGCGGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGa < 1:1862638/150‑1 (MQ=255) acctcCAGGC‑CATGTGCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGa > 2:1152274/3‑150 (MQ=255) acctcCAGGC‑CATGTGCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGa > 2:1152408/3‑150 (MQ=255) acctcCAGGC‑CATGTGCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGa > 2:135952/3‑150 (MQ=255) acctcCAGGC‑CATGTGCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGa < 1:135952/148‑1 (MQ=255) ctcCAGGC‑CATGTGCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACtttt > 2:1334209/1‑112 (MQ=255) ctcCAGGC‑CATGTGCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACtttt < 1:1334209/112‑1 (MQ=255) ctcCAGGC‑CATGTGCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGAtt > 2:203317/1‑150 (MQ=255) cAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGATTccc > 1:1492729/1‑150 (MQ=255) gggCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGATTCCCt < 1:1007726/149‑1 (MQ=255) ggCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGTCATAACATTCGCAACTGCCAGGGCATTTTCGCAATACATGGCAACTGATTTGGTTATCCTGACTATTCCCTa < 2:873971/150‑1 (MQ=255) gCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTgg < 2:1246209/130‑1 (MQ=255) gCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTgg > 1:1246209/1‑130 (MQ=255) acaTG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGATTCCCTATCa < 2:1335176/150‑1 (MQ=255) | CTTGGCAAGCTCAGCCTGCTGCATGAAAGTGGGCAGCCGCGTATTTTACTCGATGCCGTGACCTGCATTCTCGACGACCGGGGCTTCGCCGAACGCCTTTGCCAGTGCATAGCTCAGCGACGTGCGGTAATGGTCGATATTCTCCAGGCACATG‑GCCTGGAGGTGTT‑AAACGCTGACGGCACATTCTTTGTTTACGTGCGATGTCCTGCGGCTGTGAGCAACGGCAGGACATTCGCCACTGCCAGGGACTTTTCGCAATACCTGGCCACTGAGCTGGGTATCCTGACGATTCCCTATCA > NC_002947/4314626‑4314924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |