Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,995,569 Δ1 bp 9.8% coding (1185/1272 nt) bkdB → branched‑chain alpha‑keto acid dehydrogenase complex lipoamide acyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,995,5690C. 9.8% 376.0 / 36.4 122coding (1185/1272 nt)bkdBbranched‑chain alpha‑keto acid dehydrogenase complex lipoamide acyltransferase
Reads supporting (aligned to +/- strand):  ref base C (51/59);  new base . (9/3);  total (60/62)
Fisher's exact test for biased strand distribution p-value = 7.30e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.39e-01

Only 100 of 133 total aligned reads displayed.

CCTGGGTGGCATTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTGGCGGCTATGTAG  >  NC_002947/4995425‑4995719
                                                                                                                                                |                                                                                                                                                        
 cTGGGTGGCATTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGATCGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCCGCTCGTTCGACCACCGCGTg                                                                                                                                                   >  1:292481/1‑150 (MQ=255)
 cTGGGTGGCATTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCCCGTg                                                                                                                                                   >  2:2133244/1‑150 (MQ=255)
  tGGGTGGCATTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTgg                                                                                                                                                  <  2:1187746/150‑1 (MQ=255)
       ggCATTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTTGGACTGCCAGTGGTTATTGATGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACGCGGTGGTCGaa                                                                                                                                             <  2:675125/150‑2 (MQ=255)
       ggCATTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGAt                                                                                                                                             <  2:174739/150‑1 (MQ=255)
       ggCATTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACGCGGTGGTCGaa                                                                                                                                             <  1:2394909/150‑2 (MQ=255)
       ggCATTGTCAGCACGCCGGGGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGAt                                                                                                                                             <  2:914048/150‑1 (MQ=255)
        gCATTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATg                                                                                                                                            <  2:2384407/150‑1 (MQ=255)
         cATTGTCCGAACGCTGGTGGCCAGGTCTCCGGTGTTGTCAAGCGGCGGGGTCAACCGCATGGTCAGCCAGCGCTGGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATgg                                                                                                                                           <  1:2253772/150‑1 (MQ=255)
          aTTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGc                                                                                                                                          >  1:1436944/1‑150 (MQ=255)
          aTTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGc                                                                                                                                          >  2:1002412/1‑150 (MQ=255)
           ttGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCa                                                                                                                                         <  1:676010/150‑1 (MQ=255)
           ttGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCa                                                                                                                                         <  2:1795920/150‑1 (MQ=255)
             gTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATg                                                                                                                                       <  2:2192424/150‑1 (MQ=255)
                       cGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGccc                                                                                                                             <  1:988602/150‑1 (MQ=255)
                            gtCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCTCAAGATGATGAACGTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCACCCTGTTc                                                                                                                        >  2:1307059/1‑150 (MQ=255)
                               aaCACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATc                                                                                                                     <  2:1436944/150‑1 (MQ=255)
                               aaCACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATc                                                                                                                     <  1:1781890/150‑1 (MQ=255)
                                acacCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATcc                                                                                                                    <  1:1162175/150‑1 (MQ=255)
                                acacCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATcc                                                                                                                    <  1:1630874/150‑1 (MQ=255)
                                    cccGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAGCCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGc                                                                                                                <  1:1215224/150‑1 (MQ=255)
                                            tGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTg                                                                                                        <  2:1198991/150‑1 (MQ=255)
                                             ggCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTgg                                                                                                       >  1:91958/1‑150 (MQ=255)
                                                aaTCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCt                                                                                                                            >  1:2392217/1‑126 (MQ=255)
                                                aaTCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCt                                                                                                    >  2:1950499/1‑150 (MQ=255)
                                                aaTCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCt                                                                                                    >  1:1550525/1‑150 (MQ=255)
                                                aaTCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGCGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCt                                                                                                    >  2:857748/1‑150 (MQ=255)
                                                    gtcgGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGCGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTc                                                                                                <  1:857748/150‑1 (MQ=255)
                                                     tcgGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCg                                                                                               >  1:143039/1‑150 (MQ=255)
                                                        gggTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGaac                                                                                            <  1:1950499/150‑1 (MQ=255)
                                                        gggTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGaac                                                                                            <  1:1354019/150‑1 (MQ=255)
                                                          gTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGaacaa                                                                                          <  1:1406495/150‑1 (MQ=255)
                                                             aaCCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCa                                                                                                                                         >  2:780361/1‑100 (MQ=255)
                                                             aaCCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCa                                                                                                                                         <  1:780361/100‑1 (MQ=255)
                                                               ccGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGa                                                                                                                                              >  2:2293639/1‑93 (MQ=255)
                                                               ccGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGc                                                                                                      <  1:1338948/133‑1 (MQ=255)
                                                               ccGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCgc                                                                                     <  2:1567816/150‑1 (MQ=255)
                                                                 gCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCgcct                                                                                   <  2:1702205/150‑1 (MQ=255)
                                                                      gTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGcctgcctg                                                                              >  2:1195043/1‑150 (MQ=255)
                                                                         gAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTCTCGAACAACCCGCCTGCCTGTTCg                                                                          >  1:1869803/1‑150 (MQ=255)
                                                                           aCGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGt                                                                         <  2:1550525/150‑1 (MQ=255)
                                                                           aCGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGt                                                                         >  1:2149283/1‑150 (MQ=255)
                                                                               ccAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAg                                                                     >  1:1710341/1‑150 (MQ=255)
                                                                                cAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGc                                                                                                                                          <  1:503560/80‑1 (MQ=255)
                                                                                cAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGc                                                                                                                                          >  2:503560/1‑80 (MQ=255)
                                                                                cAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGt                                                                    <  2:1333153/150‑1 (MQ=255)
                                                                                cAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGt                                                                    <  2:1678667/150‑1 (MQ=255)
                                                                                  gtggtgATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGa                                                                  <  2:143039/150‑1 (MQ=255)
                                                                                   tggtgATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAg                                                                 >  2:38815/1‑150 (MQ=255)
                                                                                     gtgATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCa                                                               >  1:1297540/1‑150 (MQ=255)
                                                                                                 cAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTg                                                                        <  1:733024/129‑1 (MQ=255)
                                                                                                 cAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTg                                                                        >  2:733024/1‑129 (MQ=255)
                                                                                                   gATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATc                                                <  1:38815/150‑1 (MQ=255)
                                                                                                   gATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATc                                                <  2:326382/150‑1 (MQ=255)
                                                                                                              gcAAGCTGATGAACCTGTCCAGCTCGTATGACCACGGCTTGGGCGATGGCATGGATGCCGCATTGTAACGCCGATCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCt                                     <  1:1002412/150‑1 (MQ=255)
                                                                                                                aaGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACa                                                       >  1:388563/1‑130 (MQ=255)
                                                                                                                 aGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATcc                                                                                                                    <  1:1756800/69‑1 (MQ=255)
                                                                                                                 aGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATcc                                                                                                                    >  2:1756800/1‑69 (MQ=255)
                                                                                                                 aGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGtt                                  >  1:2193792/1‑150 (MQ=255)
                                                                                                                 aGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATACAACAGATTATCCAGACTACCCTGtt                                  <  2:2126588/150‑1 (MQ=255)
                                                                                                                 aGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGACCTGCTCGAACAACCCGCCTGCCTGTTCGTGGa                                                                      <  2:2292262/115‑1 (MQ=255)
                                                                                                                 aGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGACCTGCTCGAACAACCCGCCTGCCTGTTCGTGGa                                                                      >  1:2292262/1‑115 (MQ=255)
                                                                                                                  gatgatGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTg                                 >  1:1921592/1‑150 (MQ=255)
                                                                                                                    tgatgaACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGat                               <  2:2149283/150‑1 (MQ=255)
                                                                                                                        gaACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGatcatc                           <  2:2372064/150‑1 (MQ=255)
                                                                                                                        gaACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGatcatc                           <  1:2415830/150‑1 (MQ=255)
                                                                                                                            cTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATcggcg                       >  2:344859/1‑150 (MQ=255)
                                                                                                                            cTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATcggcg                       >  2:956588/1‑150 (MQ=255)
                                                                                                                               tCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATcggcggcg                    >  2:909839/1‑150 (MQ=255)
                                                                                                                                 cAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCggcggcggc                  >  1:2014413/1‑150 (MQ=255)
                                                                                                                                 cAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCggcggcggc                  >  1:2176747/1‑150 (MQ=255)
                                                                                                                                 cAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGCTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCt                                     <  2:531233/131‑1 (MQ=255)
                                                                                                                                 cAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGCTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCt                                     >  1:531233/1‑131 (MQ=255)
                                                                                                                                  aGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTAcc                                       >  1:1284325/1‑128 (MQ=255)
                                                                                                                                  aGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTAcc                                       <  2:1284325/128‑1 (MQ=255)
                                                                                                                                   gCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAg                                                      >  2:1587671/1‑112 (MQ=255)
                                                                                                                                   gCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAg                                                      <  1:1587671/112‑1 (MQ=255)
                                                                                                                                    tgccatCGACCACGCGGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCt               >  1:2106349/6‑150 (MQ=255)
                                                                                                                                    cTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGcc                 >  1:1050349/1‑148 (MQ=255)
                                                                                                                                    cTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGcc                 <  2:1050349/148‑1 (MQ=255)
                                                                                                                                       gTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGc                                                                <  1:795269/99‑1 (MQ=255)
                                                                                                                                       gTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGc                                                                >  2:795269/1‑99 (MQ=255)
                                                                                                                                       gTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGa                                            >  1:2073537/1‑118 (MQ=255)
                                                                                                                                       gTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGa                                            <  2:2073537/118‑1 (MQ=255)
                                                                                                                                       catCGACCACGCGGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTggc            >  2:2337864/3‑150 (MQ=255)
                                                                                                                                        ttCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGaacaac                                                                                         <  1:2223634/73‑1 (MQ=255)
                                                                                                                                        ttCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGaacaac                                                                                         >  2:2223634/1‑73 (MQ=255)
                                                                                                                                        atCGACCACGCGGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCTTGGCTGTGAGGGCGGTAGCAAGACAAGTGGTTATCCAGACTACCCTGTTGATCCTCGGCGGCGGCCCTggcg           >  1:876807/2‑150 (MQ=255)
                                                                                                                                        atCGACCACGCGGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTggcg           >  1:494822/2‑150 (MQ=255)
                                                                                                                                        atCGACCACGCGGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTggcg           >  2:2145041/2‑150 (MQ=255)
                                                                                                                                        atCGACCACGCGGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTggcg           >  2:1436848/2‑150 (MQ=255)
                                                                                                                                         tCGACCACGCGGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGt                                                                         <  1:1181482/88‑1 (MQ=255)
                                                                                                                                            accaccGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTGGCGGCTa       <  2:1710341/150‑1 (MQ=255)
                                                                                                                                              caccGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTGGCGGCTATg     >  1:1326954/1‑150 (MQ=255)
                                                                                                                                               accGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGtt                                  <  1:841130/120‑1 (MQ=255)
                                                                                                                                               accGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGtt                                  >  2:841130/1‑120 (MQ=255)
                                                                                                                                               accGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTGGCGGCTATGt    >  2:2108077/1‑150 (MQ=255)
                                                                                                                                                ccGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTggcg           <  2:644199/142‑1 (MQ=255)
                                                                                                                                                ccGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTggcg           >  1:644199/1‑142 (MQ=255)
                                                                                                                                                ccGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTGGCGGCTATGTag  <  2:1869803/150‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                        
CCTGGGTGGCATTGTCAGCACGCCGGTGGTCAACACCCCGGAAGTGGCAATCGTCGGGGTCAACCGCATGGTCGAACGGCCAGTGGTGATCGACGGCCAGATCGTCGTGCGCAAGATGATGAACCTGTCCAGCTCGTTCGACCACCGCGTGGTCGATGGCATGGATGCCGCCCTGTTCATCCAGGCCGTACGTGGCCTGCTCGAACAACCCGCCTGCCTGTTCGTGGAGTGAGCATGCAACAGATTATCCAGACTACCCTGTTGATCATCGGCGGCGGCCCTGGCGGCTATGTAG  >  NC_002947/4995425‑4995719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: