Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,424,538 | Δ1 bp | 6.8% | coding (89/915 nt) | PP_4764 → | histone deacetylase family protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,424,538 | 0 | A | . | 6.8% | 437.1 / 26.0 | 146 | coding (89/915 nt) | PP_4764 | histone deacetylase family protein |
Reads supporting (aligned to +/- strand): ref base A (75/61); new base . (4/6); total (79/67) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.13e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.54e-01 |
Only 100 of 146 total aligned reads displayed.
TCCCATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAGCGCC > NC_002947/5424391‑5424684 | tCCCATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCAcc > 2:356663/1‑149 (MQ=255) tCCCATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCAGCGCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACg > 1:1983685/1‑150 (MQ=255) cccATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGa > 1:2125147/1‑150 (MQ=255) ccATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGac < 2:2125147/150‑1 (MQ=255) ccATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGac < 2:2125165/150‑1 (MQ=255) cATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGacc > 2:2271153/1‑150 (MQ=255) tGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACCAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGaccacc > 2:1381792/1‑150 (MQ=255) gCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCt < 2:36400/150‑1 (MQ=255) cAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTg > 1:284003/1‑150 (MQ=255) aGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCTCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTgg < 2:597814/150‑1 (MQ=255) tCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTc > 1:1393827/1‑150 (MQ=255) tCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTc < 1:2439650/150‑1 (MQ=255) aCCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCg‑g < 2:307365/150‑1 (MQ=255) ccGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCTGATCTGGTACCTC‑TCCCGATGGACAAGTTCCGCCTGCTGC‑CGACCAGGTGGTCgtgca > 2:1242099/1‑146 (MQ=255) ccGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAA‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCa > 2:1544738/1‑150 (MQ=255) cGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTGTGCCTGCTGC‑CGACCAGGTGGTCgtgcag < 1:1242099/150‑6 (MQ=255) gTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCAATTCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGc < 1:2231529/150‑1 (MQ=255) tCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGACCAGGTGGTCGTGCAGca < 1:2116403/150‑2 (MQ=255) cATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCgg < 2:103409/150‑1 (MQ=255) aTGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGNggg < 2:1514765/150‑1 (MQ=255) ggCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGaccacc < 2:255938/134‑1 (MQ=255) gCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTg > 1:1895633/1‑150 (MQ=255) aaGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGac < 2:2059484/150‑1 (MQ=255) aTCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCa > 1:2003018/1‑137 (MQ=255) aTCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGaccac < 1:2271153/150‑1 (MQ=255) aGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGACCAGGTGGTCGTGCAGCAGGcg < 2:621993/141‑2 (MQ=38) cTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAg < 2:1767827/150‑1 (MQ=255) cTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCCGACCACCGACCAg < 2:1983685/150‑1 (MQ=255) gCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATGACAGCGAGGCGTTCCCGAGGCAAC‑AAAGCTGCCGGGCGGACATGTGCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGAACACCTACCAGGcc > 1:768220/1‑150 (MQ=255) cccTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGccc < 1:1531111/150‑1 (MQ=255) cTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTc > 1:221173/1‑120 (MQ=255) cTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTc < 2:221173/120‑1 (MQ=255) tGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCctgc > 1:386887/1‑150 (MQ=255) gACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGccc > 1:863938/1‑150 (MQ=255) aCCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTgcgacgc < 1:2301562/150‑5 (MQ=255) ccccATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCgg > 2:1359397/1‑150 (MQ=255) cccATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGa < 1:1590403/122‑1 (MQ=255) cccATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGa > 2:1590403/1‑122 (MQ=255) ccatccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGaccagg < 1:1158456/102‑3 (MQ=255) ccatccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGaccagg > 2:1158456/1‑100 (MQ=255) catccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGacca < 1:1382899/100‑1 (MQ=255) atccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACAt < 2:284003/150‑1 (MQ=255) atccatGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCACCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACAt > 1:1841260/1‑150 (MQ=255) atGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGc < 1:1359397/150‑1 (MQ=255) cGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCa > 1:1237369/1‑150 (MQ=255) gCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGa < 2:1895633/150‑1 (MQ=255) gCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCggg > 1:298040/1‑100 (MQ=255) gCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGaaa < 1:912897/149‑3 (MQ=255) gCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACAt > 2:2095696/1‑150 (MQ=255) tACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGAc > 1:1030134/1‑105 (MQ=255) tACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGcc > 2:2015948/1‑150 (MQ=255) aCCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGccc > 1:1376380/1‑150 (MQ=255) cACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTg < 1:2015948/150‑1 (MQ=255) aCGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTgg > 2:1814400/1‑150 (MQ=255) aCGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTgg > 1:2185046/1‑150 (MQ=255) ttACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGa < 2:863938/150‑1 (MQ=255) tACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGAc > 2:2282468/1‑150 (MQ=255) cAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCggg > 1:2120449/1‑79 (MQ=255) gCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGACCAGGTGGTCGTGCAGCAGGc < 1:390254/78‑1 (MQ=18) gCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCCGCTGC‑CGACCAGGTGGTCGTGCAGCAGGc > 2:390254/1‑78 (MQ=18) cccNGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCAAACGACATCCTCGCCCTGGCCCATGACCGCAg > 2:1497357/1‑150 (MQ=255) ccGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGc > 1:883653/1‑114 (MQ=255) ccGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGc < 2:883653/114‑1 (MQ=255) ccGGAGTTCCCCGCTGAAA‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGc < 1:1544738/150‑1 (MQ=255) cccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGcc > 2:2001317/1‑94 (MQ=255) cccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAg > 1:1683613/1‑150 (MQ=255) ccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGc < 2:192774/127‑1 (MQ=255) ccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCa < 1:509601/138‑1 (MQ=255) ccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCa > 2:509601/1‑138 (MQ=255) ccGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAgc > 1:1031946/1‑150 (MQ=255) cGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAgcg > 2:1709491/1‑150 (MQ=255) cGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAgcg > 2:1444174/1‑150 (MQ=255) gCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAgcgc < 2:1376380/150‑1 (MQ=255) cTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCt > 1:112834/1‑150 (MQ=255) cTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCt < 2:1393827/150‑1 (MQ=255) c‑acCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATg > 2:973543/1‑150 (MQ=255) acCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAAc < 2:106455/101‑1 (MQ=255) acCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAAc > 1:106455/1‑101 (MQ=255) cTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACgg < 1:1804468/150‑1 (MQ=255) ttCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGc < 2:386887/150‑1 (MQ=255) ccGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAg < 2:528205/150‑1 (MQ=255) cGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGc > 2:1812499/1‑109 (MQ=255) cGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGc < 1:1812499/109‑1 (MQ=255) gATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCAt < 2:2342703/112‑1 (MQ=255) gATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCAt > 1:2342703/1‑112 (MQ=255) aCAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTcgc > 2:1581875/1‑150 (MQ=255) cAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCCACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCCGTcgcg > 2:282297/1‑150 (MQ=255) aaGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGAACGACAATACATCGAGCGCTACATGAACGGCGAGCTGTcgcgc > 2:1773948/1‑150 (MQ=255) ttCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCGATGACGTCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAg > 1:22856/1‑150 (MQ=255) ttCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTg > 1:1967883/1‑141 (MQ=255) ttCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAg < 2:1072261/150‑1 (MQ=255) ttCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAg > 1:972684/1‑150 (MQ=255) ccGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACa < 2:1664040/125‑1 (MQ=255) atgCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACa > 1:1664040/3‑125 (MQ=255) cGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACAGGAACGGCGATCTGTCGAGGGCGGAc > 2:1084258/1‑150 (MQ=255) ctgcACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAgcgc < 1:605316/150‑1 (MQ=255) ctgcACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACAACCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAgcgc < 1:765723/150‑1 (MQ=255) tgcACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGa < 2:2225913/127‑1 (MQ=255) tgcACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAgcgtc > 2:986333/1‑148 (MQ=255) cACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCg < 1:420836/95‑1 (MQ=255) | TCCCATTGCAGTCACCCGTCATGGCAAGATCAGCACTGGCCCTGATTGCGACCCCATCCATGCCGTTGCCGCTGATCTACCACGAAGATTACAGCCCGGAGTTCCCCGCTGAAC‑ACCGCTTCCCGATGGACAAGTTCCGCCTGCTGCACGACCACCTGGTCG‑GCAGCGGGCTGACCACCGACCAGGCCCTGCTGCGCCCGGACATCTGCCCCAACGACATCCTCGCCCTGGCCCATGACCGCAGCTACATCGAGCGCTACATGAACGGCGAGCTGTCGCGCGAGGACCAGCGCC > NC_002947/5424391‑5424684 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |