| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 182,034 | Δ1 bp | 14.6% | intergenic (+23/+42) | PP_5SB → / ← PP_0160 | 5S ribosomal RNA/ferrioxamine receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 182,034 | 0 | G | . | 14.6% | 331.5 / 60.6 | 123 | intergenic (+23/+42) | PP_5SB/PP_0160 | 5S ribosomal RNA/ferrioxamine receptor |
| Reads supporting (aligned to +/- strand): ref base G (55/46); new base . (9/9); total (65/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.79e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
AGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGGTTGTTGGC > NC_002947/181887‑182183 | aGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAt > 1:1438987/1‑150 (MQ=255) gAATTTCTTGACGACCATAGTGCATTGGAACCACCTGCTCGCAGCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑g < 1:21880/150‑1 (MQ=255) aTTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCa < 1:432885/150‑1 (MQ=255) cgtGACGACCATAGCGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGGGTGGGGTTT‑CCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAg < 2:421457/148‑1 (MQ=255) cTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACa > 2:2116619/1‑150 (MQ=255) ttGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAg < 2:529601/150‑1 (MQ=255) gacgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAggg > 2:649652/1‑150 (MQ=255) gacgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAggg < 1:1763175/150‑1 (MQ=255) gacgacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGGTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAggg < 2:1374839/150‑1 (MQ=255) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGa < 1:1231800/136‑1 (MQ=255) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCt < 2:1825758/150‑1 (MQ=255) gacCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCt > 2:330419/1‑150 (MQ=255) cATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAggg < 1:748301/144‑1 (MQ=255) cATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAggg > 2:748301/1‑144 (MQ=255) aTAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAGGGGCT‑TTgg < 1:2219569/150‑2 (MQ=255) gagCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACACAAAGCCCCTGTCTGC‑ATCGCAGACAGGGGCT‑TTgggtt < 1:104165/150‑5 (MQ=17) gagCATTGGAACCACCTGATCCCATCCCGAACTAAGCAGTGAAATGATGATTCGCCGATGGTAGTGTGGGTTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCtt > 1:1003227/1‑150 (MQ=18) aTTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGACATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAg < 2:1334810/134‑1 (MQ=255) aTTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGACATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAg > 1:1334810/1‑134 (MQ=255) ttGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAgg > 2:1643757/1‑134 (MQ=255) ttGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAgg < 1:1643757/134‑1 (MQ=255) ggAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCATC‑GCAGACAg < 2:94807/131‑1 (MQ=255) ggAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAg > 1:94807/1‑131 (MQ=255) gAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGt > 2:1161650/1‑150 (MQ=255) gAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGt < 2:2045359/150‑1 (MQ=255) aaCCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGtt < 2:1978167/150‑1 (MQ=255) cTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAgg > 1:34727/1‑124 (MQ=255) gATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATc < 1:649652/150‑1 (MQ=255) atcccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCg < 1:1065251/150‑1 (MQ=255) ccatgccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATc < 2:1319160/146‑1 (MQ=255) ccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTGGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTATGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGtt > 1:2357605/1‑150 (MQ=255) ccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGtt < 2:1003227/150‑1 (MQ=255) ccatcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGtt > 2:1826487/1‑150 (MQ=255) catcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTa < 2:1438987/150‑1 (MQ=255) atcccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAg > 1:2027293/1‑150 (MQ=255) ccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCa < 2:1320962/107‑1 (MQ=255) ccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCa > 1:1320962/1‑107 (MQ=255) ccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCt‑t < 1:341857/118‑1 (MQ=255) ccGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAAc > 2:207089/1‑150 (MQ=255) aaCTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGa < 1:2049249/150‑1 (MQ=255) aCTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGAt < 1:1445137/150‑1 (MQ=255) tCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAg > 1:1668110/1‑150 (MQ=255) gAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAACCGCCTGTCTGCGAT‑GAAGCACGGGGTG‑TAACCTGGTCCGTGGTTCAATATCGGTTAGAACTGATAGCTGACCGt > 1:1116415/1‑150 (MQ=18) aaCGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTgg < 2:987336/150‑1 (MQ=255) aCGATGCATCGCCGATGGTAGTGTGGTATTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGgc > 1:1640107/1‑150 (MQ=255) tCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAGGGGCT‑TTgggttt > 1:1824859/1‑95 (MQ=18) tCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAGGGGCT‑TTgggttt < 2:1824859/100‑6 (MQ=18) tCGCCGATGGTAGTGTGGGGTTTCCCCATGTAAGAGTAGGTCATCGTCAAGATTCAAACCCACAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACAt > 2:692304/1‑150 (MQ=255) acGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTg < 1:2041276/139‑1 (MQ=255) acGCCGATGGTAGTGTGGGGGTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTg > 2:2041276/2‑140 (MQ=255) ccGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGC‑ATCGCAGACAgggg > 2:1645190/1‑87 (MQ=18) cGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTgcg > 2:933972/1‑150 (MQ=255) tGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGctc > 1:2362939/1‑150 (MQ=255) gTAGTGTGTGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTa < 2:2300434/112‑1 (MQ=255) gTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCtt < 1:1336184/150‑1 (MQ=255) gtgGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCAccc < 2:2027293/150‑1 (MQ=255) gggTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATg > 1:141493/1‑150 (MQ=255) tttCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTgg > 1:205991/1‑121 (MQ=255) cccATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCagt > 2:1623994/1‑150 (MQ=255) aTGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCagtagt > 1:2030428/1‑150 (MQ=255) tgtgAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATg > 2:1195286/1‑139 (MQ=255) tgtgAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATg < 1:1195286/139‑1 (MQ=255) tgtgAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGtt > 1:1937637/1‑150 (MQ=255) gtgAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAt < 1:2374447/137‑1 (MQ=255) gtgAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAt > 2:2374447/1‑137 (MQ=255) gggagaGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTc > 2:1216340/3‑150 (MQ=255) gagaGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAg < 1:2221283/150‑1 (MQ=255) gagTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGc > 1:1281681/1‑150 (MQ=255) tAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTgg > 2:1925581/1‑150 (MQ=255) tCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAt < 2:2093267/126‑1 (MQ=255) tCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCAt > 1:2093267/1‑126 (MQ=255) tCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGcaca > 1:442624/1‑150 (MQ=255) tCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGa < 2:1105903/82‑1 (MQ=255) tCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGa > 1:1105903/1‑82 (MQ=255) aGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGAt < 1:1623994/150‑1 (MQ=255) cAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGc < 2:1461380/150‑1 (MQ=255) aaaCCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCTCGTGT‑GTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACACGAGGTGATGTAGCt < 1:1205454/150‑1 (MQ=255) aaaCCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCt > 2:204570/1‑150 (MQ=255) aCCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGAt < 2:2267295/142‑1 (MQ=255) aCCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGAt > 1:2267295/1‑142 (MQ=255) cccAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTc < 1:1830405/150‑1 (MQ=255) cccAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGGTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTc > 2:2037251/1‑150 (MQ=255) ccAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCa > 1:309448/1‑150 (MQ=255) cAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCAt < 2:1937637/150‑1 (MQ=255) cAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCAt > 1:1890631/1‑150 (MQ=255) aaaGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCAtt > 2:1805657/1‑150 (MQ=255) aaGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTg < 2:1640107/150‑1 (MQ=255) gCCCCTGTCTGC‑ATCGCAGACAGGGGCT‑TTGTCTTTTGGGGGTTTCACCAAGGACAAAAACAGATAGCTTACCTGGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGt > 1:646617/1‑150 (MQ=255) ccccTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTa < 2:1883240/150‑1 (MQ=255) ccccTGTCTGCATC‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTa < 2:1367011/137‑1 (MQ=255) ccccTGTCTGC‑ATCGCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTa > 1:1367011/1‑137 (MQ=255) cccTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGAt > 1:1574020/1‑133 (MQ=255) cccTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGAt < 2:1574020/133‑1 (MQ=255) cccTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTaa > 2:1413205/1‑150 (MQ=255) cccTGTCTGC‑ATCGCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTaa > 1:2120303/1‑150 (MQ=255) ccTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCGTTCATTGGTAAg < 2:1281681/150‑1 (MQ=255) ccTGTCTGC‑ATCGCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAg < 2:2120303/150‑1 (MQ=255) ccTGTCTGC‑ATCGCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAg > 2:1415966/1‑150 (MQ=255) gCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCa < 2:1405242/91‑1 (MQ=255) gCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCa > 1:1405242/1‑91 (MQ=255) | AGAATTTCTTGACGACCATAGAGCATTGGAACCACCTGATCCCATCCCGAACTCAGCAGTGAAACGATGCATCGCCGATGGTAGTGTGGGGTTTCCCCATGTGAGAGTAGGTCATCGTCAAGATTCAAACCCAAAGCCCCTGTCTGCGAT‑GCAGACAGGGGCT‑TTGTCTTTTCCGGGTTTCAATATCGGTTAGAACTGATAGCTGACCGTGGCGCTCACATTGCGCTCTTCACCCATGTAGCAGTAGTTCAGGCTGGCACATGAGGTGATGTAGCTTTCATTGGTAAGGTTGTTGGC > NC_002947/181887‑182183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |