| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,211,045:1 | +T | 5.1% | coding (76/285 nt) | PP_5621 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,211,045 | 1 | . | T | 5.1% | 325.9 / 9.1 | 79 | coding (76/285 nt) | PP_5621 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (31/44); new base T (2/2); total (33/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
CTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTCAGTTAGCCAGCCAAGACTCAAC > NC_002947/4210899‑4211193 | cTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑Tcc > 2:678578/1‑150 (MQ=255) tCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCca > 1:383849/1‑150 (MQ=255) tCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCca > 1:2063773/1‑150 (MQ=255) ccGGATGGCTGTCGGCTCCATGAAGTGCTGCAGCCGACTTGCAGATTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCcaca < 2:316062/150‑1 (MQ=255) ccGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGGAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTGTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGTAAGCTGCGGAATGTAAGACTTGCA‑TCcaca < 2:871284/150‑1 (MQ=255) cTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTATTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAACGCAAGACTTGCA‑TCCACAGCAAtgct < 1:1012285/150‑1 (MQ=255) cTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAAtgct > 2:1287173/1‑150 (MQ=255) cTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAAtgct < 2:207384/150‑1 (MQ=255) ccTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGAGTTCTAGTTTTTTGAGTTTGCTTCTCAATCTCCAACCACTGACACAAGCATGCAAGCTTCGTAATGCGAGACTTGCA‑TCCACAGCAATGCTGCATCt > 2:929817/1‑150 (MQ=255) cTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTg < 2:950947/150‑1 (MQ=255) aTGAAGTGACGCAGCCGACTTGCTTCTTCGCTCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGc < 2:136390/150‑1 (MQ=255) aTGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGc < 1:268937/150‑1 (MQ=255) gACGCAGCCGACTTGAAGCGTCGCGCTCGTTGAGCAGATGATTTCTAGCTCTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCAGCTGGTGCCTACTga < 2:1148748/150‑1 (MQ=255) cGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTgaga < 1:1829504/150‑1 (MQ=255) gCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGaa < 2:1914860/150‑1 (MQ=255) cAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAAt > 1:1469407/1‑150 (MQ=255) gCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGCTTGATAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATAc < 1:1946988/150‑1 (MQ=255) gCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATAc < 1:1287173/150‑1 (MQ=255) cGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCt < 1:575357/150‑1 (MQ=255) cGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCt < 1:575204/150‑1 (MQ=255) gCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTTTTTTTTTTTCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTtcctc > 2:51996/1‑150 (MQ=255) aGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTcctcct < 2:21092/150‑1 (MQ=255) cTTCGCGCTCGTTGATCAGATGATTTTTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGTAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTca < 2:884477/150‑1 (MQ=255) gTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAg > 1:2133425/1‑150 (MQ=255) tCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGt > 1:749156/1‑150 (MQ=255) aGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTAt < 2:2063773/150‑1 (MQ=255) aGATGATTTCTAGTTTTGTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCTGTATCCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTAt < 1:746358/150‑1 (MQ=255) gatgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTga > 1:2177079/1‑114 (MQ=255) gatgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTga < 2:2177079/114‑1 (MQ=255) atgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTga > 1:118406/1‑113 (MQ=255) atgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTga < 2:118406/113‑1 (MQ=255) atgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTg > 1:902277/1‑150 (MQ=255) atgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCATCCTAAGCAGCGACAGCtcgccttt > 2:13346/1‑143 (MQ=255) tgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCTGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTga > 1:987596/1‑112 (MQ=255) tgatTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCTGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTga < 2:987596/112‑1 (MQ=255) tttCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAACATCCCA‑CCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTc < 2:1775227/150‑1 (MQ=255) ttCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCa < 2:209923/150‑1 (MQ=255) tAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATAGCTTTCCTCCTCAGCAGCCACAGCTTGt > 2:1410597/1‑138 (MQ=255) tAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGt < 1:1410597/138‑1 (MQ=255) gAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTg < 1:1388025/150‑1 (MQ=255) gAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTg < 2:1469407/150‑1 (MQ=255) gAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAAGACCGTTCCTCCTCAGCAGCCACAGCGTGTATTGACTCACCGTATCGCATg < 2:635927/150‑1 (MQ=255) ggTTGCATCTCAATCTCCACCCACTGACACAAGAATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGa < 1:13346/150‑1 (MQ=255) gTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAg > 1:427827/1‑150 (MQ=255) gCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCACTAGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTa < 1:1204241/150‑1 (MQ=255) tctcAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGa < 2:254089/125‑1 (MQ=255) tctcAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGa < 2:1445543/125‑1 (MQ=255) tctcAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGa > 1:1445543/1‑125 (MQ=255) tctcAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGa > 1:254089/1‑125 (MQ=255) ccAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTaa < 1:929817/150‑1 (MQ=255) aaCCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATg > 2:393888/1‑150 (MQ=255) aaCCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATg > 2:1087443/1‑150 (MQ=255) aCCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGCTAGAAATCACCTAATGc > 1:2101466/1‑150 (MQ=255) ccACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCa > 1:225238/1‑150 (MQ=255) cACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGa < 2:1541764/129‑1 (MQ=255) cACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGa > 1:1541764/1‑129 (MQ=255) aCTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAag > 2:2402450/1‑150 (MQ=255) cTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAaga < 2:1018520/150‑1 (MQ=255) cacaAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCga < 2:383849/150‑2 (MQ=255) acaAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTTGTGcc > 2:1433933/1‑60 (MQ=255) acaAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTTGTGcc < 1:1433933/60‑1 (MQ=255) aaGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGgcgc < 2:712855/57‑1 (MQ=255) tGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACttt < 1:51996/150‑1 (MQ=255) gCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACtttt > 1:2076637/1‑150 (MQ=255) aaGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTAt < 1:504790/91‑1 (MQ=255) aaGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTAt > 2:504790/1‑91 (MQ=255) tgtggaTGCAAGTCTTGCATTCCGCAGCAATGCTGCATCTGGTTCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGtt > 2:394243/6‑111 (MQ=38) tgtggaTGCAAGTCTTGCATTCCGCAGCAATGCTGCATCTGGTTCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGtt < 1:394243/106‑1 (MQ=38) tgtggaTGCAAGTCTTGCATTCCGCAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGtt > 2:1410045/6‑111 (MQ=38) tgtggaTGCAAGTCTTGCATTCCGCAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGtt < 1:1410045/106‑1 (MQ=38) ggAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTCAGTTagc > 2:553471/1‑150 (MQ=255) gCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCCCGCCGCGACGCAGAAATCACCTACTGCAAGAGCGTATGCCTTTTTCAGTTagccagcc > 2:1709355/1‑150 (MQ=255) cAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTCAGTTAgccagcca < 1:553471/150‑1 (MQ=255) cAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTCAGTTAgccagcca > 1:969289/1‑150 (MQ=255) cAAGACTTCCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATAcc > 2:2238407/1‑50 (MQ=255) cAAGACTTCCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATAcc < 1:2238407/50‑1 (MQ=255) gACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTCAGTTAGCCAGCCAAGa < 2:902277/150‑1 (MQ=255) cA‑TCCACAGCAATGCTGCATCTGGTGTGAATTTAGAAGACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTCAGTTAGCCAGCCAAGACTCAAc < 2:2133425/150‑1 (MQ=255) cA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTCAGTTAGCCAGCCAAGACTCAAc < 1:451051/150‑1 (MQ=255) | CTCCCGGATGGCTGTCGCCTCCATGAAGTGACGCAGCCGACTTGCAGCTTCGCGCTCGTTGATCAGATGATTTCTAGTTTTTTGAGGTTGCATCTCAATCTCCAACCACTGACACAAGCATGCAAGCTGCGGAATGCAAGACTTGCA‑TCCACAGCAATGCTGCATCTGGTGCCTACTGAGAATACCTTTCCTCCTCAGCAGCCACAGCTTGTATTGACTCACCGTCTCGCCTGGAGTTAGAAATCACCTAATGCAAGAGCGTATGACTTTTTCAGTTAGCCAGCCAAGACTCAAC > NC_002947/4210899‑4211193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |